NONHSAT037688
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT037688 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1753 nt |
Genomic location |
chr14-:73710726..73712687 |
Exon number |
2 |
Exons |
73710726..73711952,73712232..73712687 |
Genome context |
|
Sequence |
000001 CCCTTGCCTG CCCCATCGGA GCCGCCGGAG GTGGAGTCCG CCCCCCGGAC CCCCGAACTC CTGTGCGTGC CCCTCCATGG 000080
000081 TGCTCTAGGC TGTGGAGGGC AAGGCCAGTC CCCGGGAGCA GGGTGAGGAA GGGGCCCCCA CGCAGCCCTG CTGTGGATTG 000160 000161 GCGGGAGGAC CCCAGGCTGG GCCAACCCAG CAGCCCGCGG CCAGGAGCGG GCATCCCAAT GGGGAAATCG GCCAGGAGGG 000240 000241 GCTGGGGAAG CTGGTGCCTT CGCCCGCGCC CCGTGAGCTT TACCTCCGTG CGACAAGAGC GGTGGCTCCG GGCGGGGCCC 000320 000321 ACGCAGCTGG AGCCTCCATC TCTCCTGCGG GACCAGAGCA CCGGGAAGAC CTGACCGAGA CCCACCGTCC CTGCCCCCGT 000400 000401 TCTGGGGCTC TCTGCAGGCC CCAACTTCTG CGGGACTCTC CAGTGGGAGC AGCAAGGGTT CTCAGGAACA ACCCCTATAC 000480 000481 AAACCGGGAC AGAGGCACCT CACTACTCCT TCTGTGCCCC ACCTTCTCCA CTGACCCTGC CGGAGTGCAG CACACACAGC 000560 000561 AAGCATTTAA TAAATCGCTT GAAGTGGGGA ACATCTGTAC TCGGTAAAGA AACCACAGGA ATTGGGAACT GCCGGTTGAA 000640 000641 GATTATTTAC CAGTTCCAGC AAAATTGACT GCACCTGCCA TACTGCAGGC CGGTGCAGCA TCAGGAGCTG GAGACCAGGG 000720 000721 GCAACAGGCA GCACGCGTGC TCCAGCTCAG AGTGGAAGGC CCTGGGAAAT GGTTTGATTT CCTGCGCTGA ACTGATGCTG 000800 000801 CTTCCAGAAT GAATCTGCTC CTTGGTGGGT TCTGCTGATG TGGCCAGTGC TAGCCTAGGC CACGACCACC TAGCCCACCA 000880 000881 CCCAGAAGGC AGCATTCCCT GCTCCTGCTT TAACAAGCTG GCCCATTTTC ATCTCTCCTA CCTCTGGGAG TAGCAGGGGC 000960 000961 GCTCCCGGAA GCTGACACCC CCTCCACAGG TCCGGCTGCA GGGGCTCCAC TGGCCCCAGG GTCCCCAGGT GTCACTCTGC 001040 001041 CGCCTCACCT TGGGAGCCTG CAGAAGACAG GACCATGCAT CAGCATTCCC CACTCACAGC CTGAGCCCAG AGGCCCCTCC 001120 001121 AAAGATGCTC TGCCTAAAAC CCTCCCCTAC CCATCAAGGA GTCTGGGATT CTCCCTTCCA GGGCCCACCT TTAGGACTCA 001200 001201 GCAACACTGC CGGGCACCCC AAAACATATT CCTTTTCAGA ATTAGCCTGC TTTCCTCATA AGGAGCTGAG AGCCAGGCCT 001280 001281 GGAGGGCGGG AGCAGGAGCA GCTGGGAAGA GTTTGGAGTT TCAGGGGCCA CTGGAGGGGA GGGACCCTAC AGCCAGGGGC 001360 001361 AGTTTGAGGG TCCAGGCATT TGTAGGTTAA CCGTGATGTA GGGGAGGGGG GCCTAAAAGA AAATAAAGGG AAGCAACGTG 001440 001441 GGGGGATCCT GCTAATCTGG CCGAGACTCC CAGGAGTACC CCAATATTCA TCCCCTCCTT CTCCCATTGT GAGAGAATGC 001520 001521 TTGAAAACTT GACTCAGCTG GGTACCTGGC TGCCCAAAAT TTTAAAAAAA AATACATTTC CTGGACTGCC TGCAGCTAAC 001600 001601 TGTGGCTACA TCACTTAGTT CTCATCAGTG AGATGTAAAT ACAAGTGTTG GGCAGCTGCC GCAAATAATC TCCTTAAGAG 001680 001681 AGAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAA |
Predicted Small Protein
Name | NONHSAT037688_smProtein_1124:1366 |
Length | 81 |
Molecular weight | 8837.9214 |
Aromaticity | 0.1 |
Instability index | 59.74 |
Isoelectric point | 9.68914794922 |
Runs | 9 |
Runs residual | 0.0263157894737 |
Runs probability | 0.0215117077863 |
Amino acid sequence | MLCLKPSPTHQGVWDSPFQGPPLGLSNTAGHPKTYSFSELACFPHKELRARPGGREQEQL GRVWSFRGHWRGGTLQPGAV |
Secondary structure | LEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHL LLEEEEELEELLLLLLLLLL |
PRMN | - |
PiMo | - |