NONHSAT037820
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT037820 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
698 nt |
Genomic location |
chr14+:75348617..75356436 |
Exon number |
5 |
Exons |
75348617..75348719,75349294..75349327,75352289..75352337,75355798..75355850,75355978..75356436 |
Genome context |
|
Sequence |
000001 CTATATCCGG TGTCCGCCCG CCCTCGGCTC CTCCGCCGTG ATGCTGTCCC GATCCCGCTG TGTGTCTCGG GCGTTCAGCC 000080
000081 GCTCGCTCTC CGCCTTCCAG AAGGGGAACT GCCCTCTAGG GAGACGTTCC CTGCCTGGGG TCTCCTTATG CCAGGGACCA 000160 000161 GGTTACCCTA ACAGCAGGAA GGTTGTCATT AACAACAGTG TCTTCAGTGT TCGCTTTTTC AGAACTACAG CTGTATGCAA 000240 000241 GGATGACTTG GTTACAGTCA AAACCCCAGC GTTTGCAGAA TCTGTCACAG AGGGAGATGT CAGGTGGGAG AAAGGTAAGA 000320 000321 TTTAGtttcc tatttttttt tttttttttt ttgagacaga gtcttgctct gttcccagcc tggagtgcag tggtatgatc 000400 000401 tcggctcact gcagcctctg cctcccaggt tcaagtgatt ctcctgcctc agcctcccga atagctggga ttacaggtgc 000480 000481 ccaccaccat gcctggctaa gttttttgta tttttagtag agacagggtt tcaccatgtt ggtcaggctg gtctcaaact 000560 000561 cctgacctca ggtgatctgc ccacctcagc ctgccacaaa gtgttgggat tacaggcctg agccactgcg TGAGCCACTG 000640 000641 CGCCTGGCTC CTCTCACTTC TTAAGTTTAA GTGCTATCTA AAATTCTCCC CTCCCCTC |
Predicted Small Protein
Name | NONHSAT037820_smProtein_242:397 |
Length | 52 |
Molecular weight | 6133.1576 |
Aromaticity | 0.21568627451 |
Instability index | 69.2784313725 |
Isoelectric point | 12.180847168 |
Runs | 8 |
Runs residual | 0.00262085032033 |
Runs probability | 0.0510952128599 |
Amino acid sequence | MTWLQSKPQRLQNLSQREMSGGRKVRFSFLFFFFFFLRQSLALFPAWSAVV |
Secondary structure | LLLLLLLHHHHHHHHHHHHLLLLEEEEEHHHHHHHHHHHHHHHLLHHHHLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooo |