NONHSAT037960
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT037960 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1009 nt |
Genomic location |
chr14-:77563222..77564230 |
Exon number |
1 |
Exons |
77563222..77564230 |
Genome context |
|
Sequence |
000001 CGCACTGTCT TGGTGcgtgc cgccgtgccg ccgtgccgcc gtTGGGGGTG GGGGCCGGGG CGAGTCGTGT CCGGCCTGTG 000080
000081 CGCGTGCCGG GAGCGACAGT GCCCGGCGTG GGAGAGCGGG CGTGCGGGCG GCCTCAGCCT GGAGTCGCCG TGACAGGGGT 000160 000161 GCCAGACCTC CCCGCGTGCT CCTCGCATTT TCTCTACGCC TGTCGCCCTG TTTGTTTTTT GTTCCCGTCC ACCCTCGAGA 000240 000241 CCGTGCTTCA CGAGGTCGAG GCGCGATGAG TTATTTTAAG TAGATGATTT CATGACCTTT GATGTTTGAC TGACTTTGTC 000320 000321 ATGTGCTATG GGTTTTATAT GGATGCTGTT TCTTGGTGAA GGTTCACGGT GAACACACGT GTGTAACAGC TAAAGAAAAA 000400 000401 AAGGGCTTGG GATCAGTTGA CGTTCTGATG CCTTGAATCA GTGAAGGTTA CTTAGAAAAA GAATTATTTC GCTAGTGAAA 000480 000481 AAGAGGACAT GGGCGAGTTT AAAGAGTTGA CGGGTCGAGG CAGATTCAAG AGCTGAGCTG TCCAGTAAGA TGGTCACTAA 000560 000561 CGACTGGATA agtttctcag ttgtactagc cacatttcag gagctcagtg acctctttat tggacagtgc agattatata 000640 000641 tagcccattc ccagcatcgc agaaagttat attggacagt gctgATTTAG ATAGTGGGGA ATTGTTTTAT ACTGGTCATC 000720 000721 CAGGCCTTTG TAAGTGCTGC TAGGTCGTGG TTAATCACGT TAGTCCTCTA GACACAGGTA ATTCTAATGT ATTACTGGGT 000800 000801 ATGGGTGTAC TTGTTAGTAG TCAGCTTTAC CAACAAGTAA TATGCCTACA CCATGTAAGG CTTTTGTTTT GGGGACAGAG 000880 000881 TGAAAGCAAT AGTTAACAAT TACCAAGTAA TTAGGAGCCG GGCCGCTTTA TATGCATCCT TTTATGATTC CTTACAAGTT 000960 000961 TATGACGCAG GTGGTATTTT TTTCCAGTTG TGTGGCGTTT TTGCCCATT |
Predicted Small Protein
Name | NONHSAT037960_smProtein_800:895 |
Length | 32 |
Molecular weight | 3560.0675 |
Aromaticity | 0.0967741935484 |
Instability index | 55.3516129032 |
Isoelectric point | 6.68890380859 |
Runs | 5 |
Runs residual | 0.0399865591398 |
Runs probability | 0.0429606076666 |
Amino acid sequence | MGVLVSSQLYQQVICLHHVRLLFWGQSESNS |
Secondary structure | LLEEEEHHHHHHHHHHHHHHEEEEELLLLLL |
PRMN | - |
PiMo | - |