NONHSAT039216
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT039216 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1870 nt |
Genomic location |
chr14+:90849671..90851540 |
Exon number |
1 |
Exons |
90849671..90851540 |
Genome context |
|
Sequence |
000001 CCAACCACTG CAGGGTCGCG CCGGCCTATC AGAGCGTCCT TGTCAAACTG AACGAGGAAA GAAGCCTCAG CAGCGCCAAC 000080
000081 TAAGCAACCG GCTACAGACC GCGTTCCGGT GCGTGTGTGA CGACACCGCC GTGTGCTCCT CCGCTGGGAG ATATAGTGCC 000160 000161 CTCGCCCTTG CCTCGCCCCG CCCGCGAGCG CTCCAAAGGC TTGGGCGTGC GGCTTGCTCT TCCTCTCCGC TTGACGGGCG 000240 000241 GTGGTTCCCC CGAGACAGAA ACTTGACTGA AAAATAATAC CAAATACCCG TGCTGCGGCC CGTGGCCCTC CATAGGGCCA 000320 000321 CCTGAACTAG CCTCGCCTGT CCCCTTGCTC TTTGCCGTTC GTCCTTCGCG TTTTGTGAAA ACAGTTGGCG CCGCAGAAAT 000400 000401 GAGATAAACG CCCCTGAGCT CGAAACCCGC ACTCGAACTG CCACCGAGCC GACCCTTCCT GTTTTGGAAC TCAGGGCCCG 000480 000481 GCCACCCGAG AAGCACCCTC ATGGGCACTT TGTTTCTACA AGGGCCCGTT TCCATTTCCT TCCTAAGGTT TCCTTATCCC 000560 000561 CTGCGGCAGG AGGGGCCCGC TGGGCTCGGG TTTTCAGCTG CGTTGGAGCT GCAGAGGCTG CGGAGTGAAC GCGGCCAGGA 000640 000641 GCCCGCCTGG GAGCGCGCAG CGCTCTAGGA GCCGAGAGCC GCTGCTTGGC CCTCGCTGGC CGGGTAAACC GAGGGGAAGC 000720 000721 TCCTGGCCTC CTTTCCCTTA AGCCCCTTAT TGCTTCTGTG GGGAAGGCCC TCCTAGGTAG AGGCGAAGGA CCGGGGAGAT 000800 000801 AACCTCTCCC ATGGGCCACA TCCGCTGCCA TGGTCTGTGT CGTGCCAGAA GGTACCTCTC AGCCCTCAGT GCCGtgaaaa 000880 000881 atctgacact caagaaggtc gattgacacg cctaacgtcg cacagcaatt tagtagcaca gcacagaata gaagctaccc 000960 000961 aggctggctg tctcccaagc ctgtgtttct ctaccacaca cagtaacact gcgtcTTCCA GAGCTGAAGC TGTAGTCGTG 001040 001041 AGATGGCTCA AGCATTTGGG GGAACTGGAA GGCAGACCTG GGAATGAAGA GAATTGTTTT CTTTGAGCAG AATTTTCAGT 001120 001121 CAGTGGCCTA CAGAAAAAGT AGAGAAGAAA CATTACTTGG TTATTGTCAC TGTTCCAAGA GGCTAGCTAA GAAAATTAAA 001200 001201 TCGTGTGGAT TTCTTAAAAC TGCTGTTTCG TGTAACCTCC AAACATCTAT CTGTGACTTT GGCACAAGGT GGCTTGGATG 001280 001281 TCTGATCTTT GTGATTGAAC TATATTCACA TCCTGTTTCT AAGATTGTGT TACTAATGGT TTTTCCTGAG GTTTTACAAC 001360 001361 CAGTAGTGGT GTCTGCGCTG TAGTCAAGTG AAGGTTCTTT GATCTAAGGC TATACTTGTC AGTTGCTGTT TATTGCTTCT 001440 001441 TAAACTTTTA CTCAAAGTCT TCTTCAAAAA GGAGAAAAGC TGTGGTTTTC TTTCTGTAGG CGGTTAGTAG TCATTCCCAA 001520 001521 AGATGTTTGC CAAGTGAGCA AATATATTGG AACTTCCAAA TGAGCATTTC ACTGTAAAAA TACCTGCCCC AAAAACAATA 001600 001601 CGACATGTTT CTTTTGCAAT TTATATGGTA TAGGAAACAT GTTCTGTGAC TTCTTTGTAG CAAGCCAGAT CCTGATGTGA 001680 001681 AAAAAGAGAT CTAACTGTGC CAATAACAAA TTGAGAATTC TTGAGTAAGT TCCTTTCCTG TGTTCTTGGG ACCTCAGTTt 001760 001761 tctttttgtt tgtttgtttg agacggagat tcgctctgtc gccaggctgg agtgcagtgg cgcgatctcg gctcactcca 001840 001841 cctccacctc ccaggttcaa gcgattctcc |
Predicted Small Protein
Name | NONHSAT039216_smProtein_500:667 |
Length | 56 |
Molecular weight | 6116.9619 |
Aromaticity | 0.109090909091 |
Instability index | 70.84 |
Isoelectric point | 8.48992919922 |
Runs | 9 |
Runs residual | 0.0121212121212 |
Runs probability | 0.0458105163988 |
Amino acid sequence | MGTLFLQGPVSISFLRFPYPLRQEGPAGLGFSAALELQRLRSERGQEPAWERAAL |
Secondary structure | LLEEEELLLEEEEEELLLLLLLLLLLLLLLHHHHHHHHHHHHHLLLLLHHHHHLL |
PRMN | - |
PiMo | - |