NONHSAT039406
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT039406 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
820 nt |
Genomic location |
chr14+:95100042..95100861 |
Exon number |
1 |
Exons |
95100042..95100861 |
Genome context |
|
Sequence |
000001 GACTGTCTGC AGGACAATGA CTGTCTGCTC TATGGCCATA GACAACCCAT GTCCTCCTTC TGGGCTTGCT TCAAGAGCAT 000080
000081 CTTCTATATC CATACAGAAA CCGGCAGCAG CCGGACACAT CTGCTTGGTT TCGTGCTGTT TCTCTTTTTG GAAATCTTGA 000160 000161 CCATGCTCAG ACCAAATATG TACTTCACGG CCCCTCTACA GGAGAAAGTG ATTTGGAGGA TATTCCTTTT GGGTGCAGTG 000240 000241 CTCTAGCCTC AGCTTCTCCT GGCTCGTCCG CACTGTCTAC TGTCATTCAG AGAAAGTCTC TCGGACTTTT TCCAAACTGT 000320 000321 ACTATTCAGG GATTGCTCCA CTGCTCATAA GGAGCTTCGT CCCCTGGCTC TGTTACTCCT TCTACTGCTC GCCACAGCCA 000400 000401 CGGCTCATCT ACTTCTCCAT CATCTATGTC CTGGGCATCT CTGCCATCAT TGTGACAGTG GGACCGGTTT GTCACTCCTA 000480 000481 AGCACCGGCA GACAAGGGCA GGGGTGTTGC TGGGACTTGG CTTGAGCGGT ATTGTGCCCA CCATGCACTT TCCTATTGCT 000560 000561 GAGGGTTTCG TCAAGGCCAC CACAGTGGGC CAGATGGGCT GGTTCTTCCT CGTGGCTGTG ATGTACATCA CCAGAGCTGG 000640 000641 CCTTTATGCT GCTTAAATTC CTGAGCGCTT CTTTCCTGGA AAATTAGACA TATGGTTCCA GTCTCAGCAG ATTTTCCATG 000720 000721 TCCTCATGGT GACGGTGGCC TTTGTCCACT TCTGTGGGGT CTCCAACCTT CAGGAATTCC ATTACAGCCG AGAAGGTGAC 000800 000801 TGCACTGATG ACTCCCTTCT |
Predicted Small Protein
Name | NONHSAT039406_smProtein_542:655 |
Length | 38 |
Molecular weight | 4095.8492 |
Aromaticity | 0.189189189189 |
Instability index | 40.6756756757 |
Isoelectric point | 8.27484130859 |
Runs | 5 |
Runs residual | 0.0446317877511 |
Runs probability | 0.062020844374 |
Amino acid sequence | MHFPIAEGFVKATTVGQMGWFFLVAVMYITRAGLYAA |
Secondary structure | LLLLLLLLEEELLLLLHHHHHHHHHHHHHHHHLLLLL |
PRMN | LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLL |
PiMo | iiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTToooo |