NONHSAT040118
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT040118 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1184 nt |
Genomic location |
chr14+:103221177..103223520 |
Exon number |
3 |
Exons |
103221177..103221926,103223080..103223165,103223171..103223520 |
Genome context |
|
Sequence |
000001 CAGCACCTCA GGGGAGAGGC TGAGTTATTT TTGCAACCCC AAATTAAATG ATGCATGGTC GCTGGCTGTG CATGCCACGG 000080
000081 GGCTTGATTT CCATTCCCCT GATTCACTCT TCCCTCCTCC AGGGCGCTCA GGCTCATGGA AACTGAGGGA AGCTCAGGGC 000160 000161 CCTGACGACC CACCAGGCCC TGGCCAGGAC ACTGCATCCT GCTGGAAAGG AATGCCCCGT GAGGGGCTCA CGGTGGATTT 000240 000241 TTAATCCCTG TTCAGGTTCC CTGCCCTCAC CCGAAAGGCC CCCACCCTTG AGCTCCCCCG GCAGCCCTGC ATCTCTCTGG 000320 000321 GGTCTTCCCA GGATGTGCTA CAGAAGCCCC AAGCTGCACA CGACCCAGCT CCTCACAGGC CTTTCTCCCA GACCCACTCT 000400 000401 CCTTAGGCCC CCTGCCCTGG GTGTCTGGGC CAGCCAGACC GCTTGCAGCC TCAGCAACCC CCAACAGCCA GCTGATCATC 000480 000481 AAATCCTGTC AATGACAGAT CCTGAGCCCA CCTCAGACCA ACCCCTATGA CCCACTTGCC AGTTGGAGTC CTGGCCTCTA 000560 000561 CTCAGACCCT TGACATCACT GTCCTCCGGT CTGACTGGTG GCCACAGTGG CCACCCACTC TGCCTGCGCC TGCCTTGGTC 000640 000641 CACACTACCA GGAGTTTCCT TCCTGAAGAG GATCCAAGGA TCCCATCACA CATCTCAGCA GCCTTTGCCT GGACCCCTCC 000720 000721 AGATAGGATT CAGACCTGCC CCTGACCTCC CCATGTTGGC CAGGCTGGTC TCGAACTCCT GAACTCAAGT GATCCACCCG 000800 000801 CCCCAGCCTC CCAAAGTGCT GGGATTACAG GCGTGACACA TCTGGCTGGC TCTTGGTGGC ATCTTGAAGG CCATTTTCTC 000880 000881 ACCCTTTATC TCTGCCAAGC TCAGTAGATA GGATTCTGTG TGTCTTCTTT TGACCCAACC ATCAGCAGCA GCAGGGAAGG 000960 000961 CATCTTTGCC TCTGTCTTTT CTTTCTTTTT TTTTTTTTTA GATGGAGTCT TGCTCTGTCT ACCAGGCTGG AGTGCAGTGG 001040 001041 CGCGATCTCG GCTCACTGCA AGCTCTGCCT CCTGGGTTCA CGCCATTCTC CTGCCTCAGC CTCCCGAGTA GGGGACTACA 001120 001121 GGCACACACC ACCACGTCCA GATAATTTTT TGTATTTTTA GTAGAGACGG GGTTTCACCG TGTT |
Predicted Small Protein
Name | NONHSAT040118_smProtein_332:529 |
Length | 66 |
Molecular weight | 7095.0374 |
Aromaticity | 0.0307692307692 |
Instability index | 64.8815384615 |
Isoelectric point | 6.69012451172 |
Runs | 9 |
Runs residual | 0.0118269230769 |
Runs probability | 0.0462226932815 |
Amino acid sequence | MCYRSPKLHTTQLLTGLSPRPTLLRPPALGVWASQTACSLSNPQQPADHQILSMTDPEPT SDQPL |
Secondary structure | LLLLLLLLLHHHHHLLLLLLLLLLLLLLLLEEELEEELLLLLLLLLLLLEEEELLLLLLL LLLLL |
PRMN | - |
PiMo | - |