NONHSAT040143
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT040143 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1466 nt |
Genomic location |
chr14+:103630635..103642185 |
Exon number |
3 |
Exons |
103630635..103630702,103636890..103637090,103640989..103642185 |
Genome context |
|
Sequence |
000001 cgcctGTGAA GGGGTCAGGG GAAATTTCCT GCTCATTTAT GGGGCCTCAT TTGGGATACG TCAGCAGGcc cccatggcct 000080
000081 ggtgtttggt ctgatcaccc caacatttct ggcacccaac gtggggctat gaagacccca gtgaaggaac actagagcat 000160 000161 gcggaactgg aggacgcatt gtcagaggac acccgaggat gactgaaaga agctcggtgg gaaagctgag cactcggaag 000240 000241 aaacagggta acaacaggac agaatgaaac aagcagtaca acaaggcatt cccctttcta tatcactcat atgagagcac 000320 000321 atactaacct ccctggacct ttaactaaac ttaatcaaag ggtggataat tacatgggga agaggatttg tttgtgttta 000400 000401 tccaggtgac aatcaggtgc ctgtgtgggt gcccaccaaa catctgaaga tctattatga gctacagcaG GAAGAGAGGA 000480 000481 CTCTGGGAAG AGCCAGATAT AAGCAATGTC ACAAATAAAC ATCTCAGAGA TGAAGGAGAA AACCAAtctc cccaaaacaa 000560 000561 tgccccctgt cagcaagaag tagctatgat cagtcatcgt tcatattcca acagcagtta gatgtgcctc ttctgagGCA 000640 000641 GGGAGtgata gggacaggag gcaaggaaat tctgggcaga agagggcagg tgcccagtga aggcccgaac ctgaagcctg 000720 000721 gaaccacagc ccaaagtgag aacatgcatt cctgttttcc cgctcaaatg ttgccttttc caaaaccacc catggcccgc 000800 000801 ccccacacct catcctatgc ccataaaaaa cccaggttcc actggcagac agcagagaag aggagaagca tctggacatc 000880 000881 agagagtaca gttggatgtt ggagagaagc agcttgactt cacagagacg gcttgatggc attgctccag gggaagatca 000960 000961 ccttcctgct ccatcccctt tccagctccc cttcccactg agtgccactt tcatcaacaa taaaatcccc tgcattcacc 001040 001041 acccttcaat ttgtgttacc cggacgccaa acaagagctg aggtaccatg ggagcagatg caaaaggctg tcacactgac 001120 001121 cctctgccct cactggtgga aagcagccac ctcatgagaa aaggcagagg gcccactgag ctgttaacac ttaagccatc 001200 001201 tgtggatggc agcactgaaa gagcactgac tataacattc cttctggggc tttgggcgtc atgggtactt ctcccagatg 001280 001281 ctgccgcagg gcgcatgcag ttttgcccct gctgacaccc aaaagcactc accctggctc ctacaactgc tcacctgcgt 001360 001361 gttccctccc acgagggttg aacacaaggg gttcgggtga gtggagtttt cccctgctgg tgccaaagct gtgggtagct 001440 001441 ccagtgcctg tacttcagtt cctgcc |
Predicted Small Protein
Name | NONHSAT040143_smProtein_743:916 |
Length | 58 |
Molecular weight | 6682.6394 |
Aromaticity | 0.122807017544 |
Instability index | 84.7526315789 |
Isoelectric point | 10.1924438477 |
Runs | 7 |
Runs residual | 0.0311403508772 |
Runs probability | 0.0181694299341 |
Amino acid sequence | MHSCFPAQMLPFPKPPMARPHTSSYAHKKPRFHWQTAEKRRSIWTSESTVGCWREAA |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHLLEEEELLLLLLHHHLLL |
PRMN | - |
PiMo | - |