NONHSAT040191
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT040191 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
1647 nt |
Genomic location |
chr14-:104146166..104147812 |
Exon number |
1 |
Exons |
104146166..104147812 |
Genome context |
|
Sequence |
000001 GGGGGGAAAA AGTGTACTTT GAAAAGAAAA TCAAAAGTTG GTCGAGTTTA GCATTCTGCC TTCTCAGAAC CTTAGAGTTG 000080
000081 TGGGGTTGGA GGCCAAGGCC TTCCTCTGAA GACTCTGAGG CAGCCTCAGC TGCCCACCCA GTGAATTCAC TCATTTTATC 000160 000161 TAAGACTCCA TCTGAAGAGG GGGCTGCCTC CATGCACAAA GTGAGTCTAG GAACCACTGC ACTGGATAAT TTAAAACTCA 000240 000241 AACTGTTTTG GTAGATCACC CGTGGCCAAC GCACCCTGGG ATGAATTCCA TCAAACCTGC AGAGCTATCA GGGGACACAC 000320 000321 CAGATACACA GCCTGCACAT GGCCTATAGA ATCAGGTGTC CAAAGTGAGA AAGGAAGCGT GGAAGGAGGA AACCAGCAGG 000400 000401 CGTGCAGAGG AGCAGCTGCT TTCATCCCCA GCAGCGACAC TTCCAGCCCG CGGGCCTGAC GGGGACACCT GCCCACGAAC 000480 000481 CCCCTGCAGG GGACACGAGT TCTCCTTCCT CTCCGAGTCC ATCTTTAAGA TGGTAACAGA GCTCTGAATC GTCACCATTT 000560 000561 TATCATCAGA TGATTTCATG TCAACATGGA CCTAGAAATA CTGTCTCAAG AGAAACTTCC TCCAGAACTT CATTCAAGAG 000640 000641 GATCACAATC TGCACCCTGG CTCCTACAGC CTAGATAAAG GACTTGTCCT TCTATACGAA GCATGCAGAT ACGACAGCAA 000720 000721 CCAAGAGAAG AGTACAGTAC ACAGTTCTGA CAGGATGCGG GCGACAGGGA GGCCTGCGGG CCAGGATTTC AGTTTAGACT 000800 000801 ACTGCCCAAC TGGGGTTGAG TGGGCAAAGC AGATGCTGAT TGGTTGTCTT GGCACAGAGA AAAACCAAAG CAAGAAAGCT 000880 000881 GCCAGATAGA CAGTCAAAGA GAATGTTCTC CCTCAAATTT TGCTACTAAC ATTTTTTATA AAATATTTAT TTAGAATGCT 000960 000961 AGCTCCTACC AAATTGCTAT AGCTATAGAA AATCCTAAAG AATAAAAGGA TTTACATTGT AAGAAAGCCC AAAACTACAA 001040 001041 TTTGGCAGAA CATCTGTAGA ATTATAACTA ATCAAACTGT ACTACGGCAA CTTCAAAAAA CCAACTGTGC CCCTAGATGA 001120 001121 GTCAAATGCC GCCTTCAATT CTCCCTGACA AAAGTAAAAT ACCAAAGACA TCAGCTTATG TATCAAAAAA AAAAAAAAAA 001200 001201 ATCCATGTGC TAAAAAATTC ACTGGAGAAA AAATGTCCAG AAGGCCACAT GGTCTTTGGC AACCACTGGA TAAACAGCAG 001280 001281 TGGTTAGGAA TTTCCAGGGG CAAACCAGTA AAACCCAGAG GGGGCCCTGT GCAGCCTCTC AGGCACATGG CGGGCTGGCA 001360 001361 ACCAGGAAGA GCCAGCCCCA AAGATCTGGA CGCCCTCTCA GGGGAAATGC AGGACGCTCA GGACTGAGGC AGGACATCAA 001440 001441 GAGAGCAGCC ATGTAAGCTC TTGTTTCTGA CCTGTTTTCT AAAAACAAAT TCCACTTAAA CAGCATCTCC CTTTAAAGCA 001520 001521 TTTCAACTCA TTCTAACAAA ATCTAGAGCA GCCTGGTCAG TGAAGTTAGG AGCACTGGAG TTAGCAATGA AATGGGTGAG 001600 001601 TTAAAGAAGC AAGTTAGTTA TCTGCCACAC TGATCCCAAT ATTAAAA |
Predicted Small Protein
Name | NONHSAT040191_smProtein_1232:1426 |
Length | 65 |
Molecular weight | 7152.0884 |
Aromaticity | 0.046875 |
Instability index | 72.159375 |
Isoelectric point | 10.3965454102 |
Runs | 9 |
Runs residual | 0.00796875 |
Runs probability | 0.0298533827946 |
Amino acid sequence | MSRRPHGLWQPLDKQQWLGISRGKPVKPRGGPVQPLRHMAGWQPGRASPKDLDALSGEMQ DAQD |
Secondary structure | LLLLLLLLLLLLLLLLEEELLLLLLLLLLLLLLLHHHLLLLLLLLLLLLHHHHHHLHHHL LLLL |
PRMN | - |
PiMo | - |