NONHSAT040191

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT040191

Source

NONCODE4.0

Same with

,

Classification

intronic(AS)

Length

1647 nt

Genomic location

chr14-:104146166..104147812

Exon number

1

Exons

104146166..104147812

Genome context

Sequence
000001 GGGGGGAAAA AGTGTACTTT GAAAAGAAAA TCAAAAGTTG GTCGAGTTTA GCATTCTGCC TTCTCAGAAC CTTAGAGTTG 000080
000081 TGGGGTTGGA GGCCAAGGCC TTCCTCTGAA GACTCTGAGG CAGCCTCAGC TGCCCACCCA GTGAATTCAC TCATTTTATC 000160
000161 TAAGACTCCA TCTGAAGAGG GGGCTGCCTC CATGCACAAA GTGAGTCTAG GAACCACTGC ACTGGATAAT TTAAAACTCA 000240
000241 AACTGTTTTG GTAGATCACC CGTGGCCAAC GCACCCTGGG ATGAATTCCA TCAAACCTGC AGAGCTATCA GGGGACACAC 000320
000321 CAGATACACA GCCTGCACAT GGCCTATAGA ATCAGGTGTC CAAAGTGAGA AAGGAAGCGT GGAAGGAGGA AACCAGCAGG 000400
000401 CGTGCAGAGG AGCAGCTGCT TTCATCCCCA GCAGCGACAC TTCCAGCCCG CGGGCCTGAC GGGGACACCT GCCCACGAAC 000480
000481 CCCCTGCAGG GGACACGAGT TCTCCTTCCT CTCCGAGTCC ATCTTTAAGA TGGTAACAGA GCTCTGAATC GTCACCATTT 000560
000561 TATCATCAGA TGATTTCATG TCAACATGGA CCTAGAAATA CTGTCTCAAG AGAAACTTCC TCCAGAACTT CATTCAAGAG 000640
000641 GATCACAATC TGCACCCTGG CTCCTACAGC CTAGATAAAG GACTTGTCCT TCTATACGAA GCATGCAGAT ACGACAGCAA 000720
000721 CCAAGAGAAG AGTACAGTAC ACAGTTCTGA CAGGATGCGG GCGACAGGGA GGCCTGCGGG CCAGGATTTC AGTTTAGACT 000800
000801 ACTGCCCAAC TGGGGTTGAG TGGGCAAAGC AGATGCTGAT TGGTTGTCTT GGCACAGAGA AAAACCAAAG CAAGAAAGCT 000880
000881 GCCAGATAGA CAGTCAAAGA GAATGTTCTC CCTCAAATTT TGCTACTAAC ATTTTTTATA AAATATTTAT TTAGAATGCT 000960
000961 AGCTCCTACC AAATTGCTAT AGCTATAGAA AATCCTAAAG AATAAAAGGA TTTACATTGT AAGAAAGCCC AAAACTACAA 001040
001041 TTTGGCAGAA CATCTGTAGA ATTATAACTA ATCAAACTGT ACTACGGCAA CTTCAAAAAA CCAACTGTGC CCCTAGATGA 001120
001121 GTCAAATGCC GCCTTCAATT CTCCCTGACA AAAGTAAAAT ACCAAAGACA TCAGCTTATG TATCAAAAAA AAAAAAAAAA 001200
001201 ATCCATGTGC TAAAAAATTC ACTGGAGAAA AAATGTCCAG AAGGCCACAT GGTCTTTGGC AACCACTGGA TAAACAGCAG 001280
001281 TGGTTAGGAA TTTCCAGGGG CAAACCAGTA AAACCCAGAG GGGGCCCTGT GCAGCCTCTC AGGCACATGG CGGGCTGGCA 001360
001361 ACCAGGAAGA GCCAGCCCCA AAGATCTGGA CGCCCTCTCA GGGGAAATGC AGGACGCTCA GGACTGAGGC AGGACATCAA 001440
001441 GAGAGCAGCC ATGTAAGCTC TTGTTTCTGA CCTGTTTTCT AAAAACAAAT TCCACTTAAA CAGCATCTCC CTTTAAAGCA 001520
001521 TTTCAACTCA TTCTAACAAA ATCTAGAGCA GCCTGGTCAG TGAAGTTAGG AGCACTGGAG TTAGCAATGA AATGGGTGAG 001600
001601 TTAAAGAAGC AAGTTAGTTA TCTGCCACAC TGATCCCAAT ATTAAAA
[back to top]

Predicted Small Protein

Name NONHSAT040191_smProtein_1232:1426
Length 65
Molecular weight 7152.0884
Aromaticity 0.046875
Instability index 72.159375
Isoelectric point 10.3965454102
Runs 9
Runs residual 0.00796875
Runs probability 0.0298533827946
Amino acid sequence MSRRPHGLWQPLDKQQWLGISRGKPVKPRGGPVQPLRHMAGWQPGRASPKDLDALSGEMQ
DAQD
Secondary structure LLLLLLLLLLLLLLLLEEELLLLLLLLLLLLLLLHHHLLLLLLLLLLLLHHHHHHLHHHL
LLLL
PRMN -
PiMo -