NONHSAT040212

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT040212

Source

NONCODE4.0

Same with

,

Classification

sense

Length

3137 nt

Genomic location

chr14-:104200090..104204033

Exon number

2

Exons

104200090..104201532,104202340..104204033

Genome context

Sequence
000001 ATGGTACGCA GGGGAGGCCT GGGGCCACAG TGGTGCTGTC TGCTGTGGTA CTGCCATGGC AACAGTCAGC CGGTGCCAGA 000080
000081 GAAGCTTCAG CACAGCtttc tgtttgtttt ttttaagaca ggagacaagg tctcattctg tcacccaggc tggagtgcaa 000160
000161 tgtcgcaatc atggctcact gcagcctcga cctcccgggc tcaattgatc ctcccacttc agcctcccaa gtagctggga 000240
000241 ctacaggctt gtcccaccac agccagctaa ttttttgtac tttttttttt tttttgtaga gacagtgttt cgccatgttg 000320
000321 cccagggtgg tctcgaactt ctgggctcca gcgatctgcc cactttcagc ctcctaaagt gctgggatca caggtgtgag 000400
000401 ccaccgtgcc tggcAGCACA GCATTCTCGA GCTGTTCCAC CTTCTTCAGG GGCAGCCAGG ATGTCTCACT CGAGTGAAGG 000480
000481 TCACACTGCC CCTTGTTTTC ATTCCTGAAA ACATGTTTGA AAGTCCATGT TGTTAGAAGG ATTCTGTGCC AGATTCCCAA 000560
000561 GAAAACAAAA TGACTTGGCT GTGCTTTGCA TAGATGTTCT GTACCCTTGC TTCTGGAAGC AGGGCCAGCT CCTTTCCTGG 000640
000641 GGTGGCCTGG GGCCCTGGCC ATTCCCCGGA AACATTTGAT GAATGAGGCT CATGTCCTAA TTAAGCTGCT TTAGCCAGGG 000720
000721 CCGCATTTTC CAAGAGCTGG AACATCTTCT CTATTCTGAG TATTAAACAG TCACAAGtca tttattccac acattacttg 000800
000801 agaacatact atgtgcccta cactggactc taggTTTGAA ATTATCCATG AAAACAGCCA TGTGATGCCC TCTTTGGCCC 000880
000881 AAGCTCCCAC AACAGAGCCA AGCAACAAAC TCTCAGGCTG TGTGGCAGGG CTAGGGGAGG CACAGCAGCC CCCAGGTGAG 000960
000961 TCCCGCCAGT GTGAGGAGGA GGCTGCCGTC ACAGTGGCAC CACCACAGGG AAGGGAAGCT CCCCATGGTC ACCACAACTG 001040
001041 GGTCTCAGAA GCAGAGTGTC CCACAGAAGG GCCCTTTCTT GGGAACCCAC AAGTAGCTGC TCAGTCAGGG CTCAGTTGTG 001120
001121 TGTAGTTTGT TCATTACCAT CCAAGAGCAG TCACAGCTGC TCTAGCTAGT GACTTTAGAA ATCTGTTCTG GCTGTGATTG 001200
001201 CTAAGCGTCA CCTTAAGAAC AGCACACTCT TGCCCTGGGG CTCAGGAGCT CGTTTGTCCT GTCTGTCCTG CAGGACTTAG 001280
001281 AAAGGGCCGG CAGCAGGAGC AGCAGCTGGG CCGGGCAGGG GAGGTATCGG GTGGGGGCCC TAGTCTTCAA TAGTGTCTCA 001360
001361 TCTCCCTCGC TGGCCTCTGT GGGGCCTGCT GAGAGCAGCC TCGGCAGCAG CACGACTGTG TCCTGTTCCT CGAGCAGGGT 001440
001441 CCCTTGCTGC AGGCCACCCT CTGCTGAGGC CTGACCATTG CTCTCTGGCT CCAGGGGTGC AGGAAAAGCT GGGTGTGATG 001520
001521 AACAAAGGTG TGGCGTATGC TCTGTGGGAC TACGAGGCCC AGAACAGTGA CGAGCTGTCC TTCCACGAAG GGGACGCCCT 001600
001601 CACCATCCTG AGGCGCAAGG ACGAAAGCGA GACTGAGTGG TGGTGGGCTC GCCTTGGAGA CCGGGAGGGC TATGTGCCCA 001680
001681 AAAACCTGCT GGGGCTGTAT CCACGGATCA AACCCCGACA GCGAACACTC GCCTGAACTT CCTTTTGGAG CACCGCATGG 001760
001761 TCTTGCCAGC TACCAGGAGC CACTTAAGAG ATTATTGTGC TGTTTTCCAG GAAAGCTGCA GCTAGAAAAT GGTCTTAATG 001840
001841 GTGCTCACTT TAGCAGACAG CGTCCACAAT GTGAATCCTA CAGTTTCCAG GTGAGGCCCT TTCTCCAGTT TGCCCATTAA 001920
001921 CTGGGAGAGG TACTTTCGCC TCCAAGGACT GAATTTTGCC AATTACTATA AATCCAAATA AATACCCACT TTCAAAACAC 002000
002001 CCACCCCTCT TGCCATTAAG AAGTCCCATA ACCCCCGGTT GGTTGCCAGT GAAGACAGAA GCTCTTACTG ACTTGGCCCC 002080
002081 GAGGCCATCA CCCCCTCCAG CAGTGAACAC TGTCCGCCGC TGTGAGGCCT GCTCCCCTGC GACCGCCCTG CCCCCCGTCA 002160
002161 CCGAATCGGA CACTCATCCT TTCTCACACT TCCCACACAT GATCCTTCTT CCCTTCATCA CCAAAGGAGC CTCTGTATGG 002240
002241 AAACATGTCC AGTGTTGCTG CCCAGTGTGT ATGCCTCCCA GTACCCACTC TGCTCGGCCG CCTTGGGGGT TCCGCTTCCT 002320
002321 GTTCCAGTTC ACCTAAAGGC TGATTGTGCA GGCCCAGCAC TGTGGCTGGA CTGCCGCGCC ACGGGCACCA GGACCCCTAA 002400
002401 GACCAAGTGA CAACTGGGAG AGCCTCAGCA TATACTCTTC TCCTCCGATC TCACAGCCTG TCATGCTGCT CAGTGTGGTT 002480
002481 CTCACCCCTG CAAGCTCAAA TTCAGTTCCC TGAATGGAGT CAGGTGCTGG AGGCCGTGGC AGCGGAGGGT GGTTGGGGTT 002560
002561 GGGGCTGGGG GTGGACTGGT GTGAGGGCAG ACCAGGGCCA GGTAGACGGG GCTGTTTGGT GCCTGAAGGA TGGCAGACGC 002640
002641 CTGGTGTCAG GAGGGGCCGC CACCAAGGAG CAGCAGCTGG GGCAGAGGAG CTGGGGTCAG GGGCCACCCC TCTCTGCCGA 002720
002721 TCTCCCTGCC TGGGCTGGCT GTGAGGCCAC CTTTGTCCCA GGCCCAGCCT CAAGGCAAGG AGGGCGCTTC ACTGAGGTGT 002800
002801 GAATTGTACG TACAGGCTTT TTATATACCA AAAGTATTTT TTGACTAGAC CATTCAAAGC TACCCGAACT ATGTTGGAAA 002880
002881 TTTTTTTTTT CTCATTAAAA TACAGGCCCT TAGGCTCTAT TTTTCATGTA TGAGTCGTGT GTAATTTATG TAAAAATGTG 002960
002961 TGTACAGACT CACTGATGCA GCACTGTAGC CCATCACCTT GGAGCACTGA CTGTACATAG TGTGGTGAAG AAAAGTGAAC 003040
003041 GCCCTTGTAG AGCAGCCCGA CCACAGGAGC ATGGCCGCTG CCAGCCCAGA CGCTGCTGAC GCTGTGTAAA TGTGCACAAT 003120
003121 AAACCCGTCT CACCCCG
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Predicted Small Protein

Name NONHSAT040212_smProtein_2513:2743
Length 77
Molecular weight 7670.5699
Aromaticity 0.0526315789474
Instability index 58.8631578947
Isoelectric point 8.53924560547
Runs 11
Runs residual 0.00332728372656
Runs probability 0.0284241460713
Amino acid sequence MESGAGGRGSGGWLGLGLGVDWCEGRPGPGRRGCLVPEGWQTPGVRRGRHQGAAAGAEEL
GSGATPLCRSPCLGWL
Secondary structure LLLLLLLLLLLLEELLLLLEELLLLLLLLLLLEEELLLLLLLLLLLLLLLLLHHHLHHHL
LLLLLLLLLLLLLLLL
PRMN -
PiMo -