NONHSAT040400
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT040400 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
706 nt |
Genomic location |
chr14+:106321999..106725508 |
Exon number |
3 |
Exons |
106321999..106322322,106329409..106329491,106725210..106725508 |
Genome context |
|
Sequence |
000001 CCCGGCCCTC ACCTGGAAGA GGCACGTTCT TTTCTTTGTT GCCGTTGGGG TGCTGGACTT TGCACACCAC GTGTTCGTCT 000080
000081 GTGCCCTGCA TGACGTCCTT GGAAGGCAGC AGCACCTGTG AGGTGGCTGC GTACTTGCCC CCTCTCAGGA CTGATGGGAA 000160 000161 GCCCCGGGTG CTGCTGATGT CAGAGTTGTT CTTGTATTTC CAGGAGAAAG TGATGGAGTC GGGAAGGAAG TCCTGTGCGA 000240 000241 GGCAGCCAAC GGCCACGCTG CTCGTATCCG ACGGGGAATT CTCACAGGAG ACGAGGGGGA AAAGGGTTGG GGCGGATGCA 000320 000321 CTCCTGAGGA GACGGTGACC GTGGTCCCTT TGCCCCAGAC GTCCATGTAG TAGTAGTAGT AGTAATCACA ATGGCAGAAT 000400 000401 GTCCATCGTA ATATACGGCC GTGTCCTCGG CTCTCAGGCT GTTCATTTGC AGATACAGCG TGTTCTTGGA ATTGTCTCTG 000480 000481 GAGATGGTGA ACCGGCCCTT CACGGAGTCT GCGTAGTATG TGCTACCACC ACTACCACTA ATAGCTGAGA CCCACTCCAG 000560 000561 CCCCTTCCCT GGAGCCTGGC GGACCCAGCT CATGGCATAG CTGCTAAAGG TGAATCCAGA GGCTGCACAG GAGAGTCTCA 000640 000641 GGGACCCCCC AGGCTGTACC AAGCCTCCCC CAGACTCCAA CAGCTGCACC TCACACTGGA CACCTG |
Predicted Small Protein
Name | NONHSAT040400_smProtein_89:337 |
Length | 83 |
Molecular weight | 9138.4316 |
Aromaticity | 0.0609756097561 |
Instability index | 54.9865853659 |
Isoelectric point | 9.17999267578 |
Runs | 14 |
Runs residual | 0.034830007391 |
Runs probability | 0.0364713452949 |
Amino acid sequence | MTSLEGSSTCEVAAYLPPLRTDGKPRVLLMSELFLYFQEKVMESGRKSCARQPTATLLVS DGEFSQETRGKRVGADALLRRR |
Secondary structure | LLLLLLLLHHHHHLLLLLLLLLLLLEEEEHHHHHHHHHHHHHHHLLLLLLLLLLEEEEEL LLEEEELLLLEEELLLLEEELL |
PRMN | - |
PiMo | - |