NONHSAT040693
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT040693 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
874 nt |
Genomic location |
chr15-:21934296..21942808 |
Exon number |
3 |
Exons |
21934296..21934647,21941616..21942108,21942780..21942808 |
Genome context |
|
Sequence |
000001 ccttggcctc ccaagtggtg aaataacagt ctgtctattg gaatcagaat cctgacaagg tccaCCCTGC ACACCACTTT 000080
000081 CTCACAAAGG TCCTCTCATC CTGAGCAGTC CTCCCTGCCA CTGATTTGTT GTCCTTCATA ATGTCCCACA ATCTGCACCT 000160 000161 GTCTTTGTTC TCCCTCATGA TACTGCTTCA CTTCTATGCC CTGAATTTCC TATAATGGGG AAGGAGCTCT AAAGCCTGGT 000240 000241 TGTAGGAACA CTTCATGAAC AGTACTGTGC ATGGCACACA ATCTCTAGCC ATCCCACTTG TCACGCTAAA ATCGATGACT 000320 000321 CGCTTCTGGT AGTGTCAGCC TGACTCTTTG GACATGCTGA GTAAGCAGAG CGAGAAAGGA AGAGGGCTTC GACCAGAGGA 000400 000401 AGAGGAGCAG AGAAAACAGG GAAGGAGAAT TCAGGGAAGT GGGGAAAATC GAGGGAGCAG CAGCGTGGGG ACTGAAGAAA 000480 000481 GAAGGGTCAG GTGTCGCTGG GCAGCCAAGA AGAGACAAAC AGCTATTACT GAATTACAGA AACTGGTTTA TTTCTGTCAG 000560 000561 AAAGCTGCAG TGCCACCTGA GTTCCAAATT TTAACATTCT TTGTAAACGG ATGGATTATG ATAAAGAAGA TGCTACCAAT 000640 000641 GAAATAGAAA ACCAACGAGA TGAGAAGACT GTGATCCTCA TGCACTCAGA GGCACTTCCC TTCTAAGTCA AAGACCATTC 000720 000721 TCACTGACTA TGTGCCAAGG CCTCACTTCA GGCTTGTGAC TCAACAAAGG GCTTTTCCAT TGATAGAAGC AGTTTGGGAT 000800 000801 TTGTAGCTAC AACTTCTTCG ATAGTTACCT GCATGTCCAT TGCTGGCAGC TGACTTCAGT CATTAAAACC TGGC |
Predicted Small Protein
Name | NONHSAT040693_smProtein_353:646 |
Length | 98 |
Molecular weight | 11285.0465 |
Aromaticity | 0.0721649484536 |
Instability index | 80.1474226804 |
Isoelectric point | 10.389831543 |
Runs | 16 |
Runs residual | 0.0334096983582 |
Runs probability | 0.0319069069069 |
Amino acid sequence | MLSKQSEKGRGLRPEEEEQRKQGRRIQGSGENRGSSSVGTEERRVRCRWAAKKRQTAITE LQKLVYFCQKAAVPPEFQILTFFVNGWIMIKKMLPMK |
Secondary structure | LLLLLLLLLLLLLLLHHHHHHHLLEELLLLLLLLLLLLLLHHHEEEHHHHHHHHLHHHHH HHHHHHHHHHHLLLLLEEEEEEEELLLEEEHHHLLLL |
PRMN | - |
PiMo | - |