NONHSAT040736
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT040736 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2252 nt |
Genomic location |
chr15-:22482243..22527799 |
Exon number |
4 |
Exons |
22482243..22483140,22483218..22483416,22489784..22490685,22527547..22527799 |
Genome context |
|
Sequence |
000001 TCTCAGGCCA GCCCCTGGGC AGAGAAAGAG TGACCCTGGT TGGGCAGCCC TATGGCCCTG TGGAGCTGAG ATGCCAGCTT 000080
000081 TAGATGGGGG GACTTACAAC ACGGGCTTTC CCTTCCCCAG TGGAACAGAA GGCGCCGGCG AGAGGCCCTC CTTGTCAGCA 000160 000161 CCAGGGACAG ATTGCTCAAG AATCTGTGTG CTCCAAGGCA CAAGAGGGGT GCTGTCTCCT TTCCTGGAGT TCCGTCTCAT 000240 000241 GCCTACGTTT CAGGTGTCCT GTCCCAGGTG CAGCTGCAGG AGTCAGGTCC AGGACCCATG AGGCCCTCAG ACACTGCCCT 000320 000321 CCACCTGTGC TGTGTCTGGG TTCTTTTTTT TACCAGTGAA TATTATTTGA GCTGAATCCA CCATCCCCTA GGCAACAGAT 000400 000401 TAGAATGGCT GGGGCACAGT TACCAGGAAT ACACATCATG ATCACCAAGA TCATCATCAA GATCACCAAG GAATACACAT 000480 000481 CATGCACCCT TTACCCAGGT CTGCATCTCC ATCAACAATG ACTCAACCAA GAGCCAGTTC TTTCTGAAGC TCAGCTCCAT 000560 000561 GGCTGGCTAG GACATGGCTG AGTATTACTG TGAAAGACTC AGTGAGGAGG TGTCCTTGTG AGCCCTGACA CAAAACTTGC 000640 000641 TGTCAGGGCA CTGAGGACCG CCAGCAAGAC TCAGGACCAC AAGGGGGACT CAAGACCACC AGGGGAAGAG CAGGTTGCAG 000720 000721 GAAGCACAGG GCCAGCCCCA GAGCAGGTGT GGGTGGAGAT GAGAGGCTGG TTTACTGCCA GGGTGTGGGG CTGCCTCTAC 000800 000801 ATCTACATGT TTCCTCCAGG GACCCTCCCT TATTTCATGA TGCTGTGCCT AGCTCTACGT CTCTGAAATA CCACAGTTTT 000880 000881 GTTGTACCAG GAGGAAACCT TCTTACAGGC ACTAAATGCA GAACAATCCC TCTGCCAGTG GTCACCAGGG CCACAGCCCT 000960 000961 GTGGAAGCTG AGTGGAACCC GGTGAGTCTT CTCCAGTCAC ACTCAGGACA GGGACCTCAG TGGGGTTCCC TGAAGAAAAC 001040 001041 AGTATTTAGG AATTCTAACC TCAGCCAAGA GAGAGGCTGG GCCAGGGTCA GGGTCACGTA GAACCTCACA GGTTTTATTT 001120 001121 CTGACCCTTC TTCTGACACT AAAGTATGCA AATCAGCTTT GAGCTATGAA ATCGTCTGTC TCATGAATAT GCAAATAACC 001200 001201 TGAGATGCAC TGAGGTAAAT ATGGATGTGT CTGTGCCCTA AGCACATCAT CCAACAACCA CATGCCTCTT CTGCAGAATC 001280 001281 TCCTTAGAGC TCAGTGCCTC ACCGTGGACT GGACCTGGAG GAACATCTTG GTGGCAGCAG CTACAGGTAA GGGAGTGCGC 001360 001361 ACTCTCAGGA CCAGTTGGTG CAGTCTGGGG CTGAGGTGAA GAAGCCTCTG TCCTCAGTGA AGGTCTCCTT CAAGGCTTCT 001440 001441 GGATACACCT TCACCAACAA CTTTATGCAC TGGGTGTGAC AGGCCCCTGG ACAAGGACTT GAGTGGATGG GATGGATCAA 001520 001521 TGCTGGCAAT GGTAACACAA CATATGCACA GAAGTTCCAG GGCAGAGTCA CCATAACCAG GGACACGTCC ATGAGCACAG 001600 001601 CCTACACGGA GCTGAGCAGC CTGAGATCTG AGGACATGGC CGTGTATTAC TGTGCGAGAG ACACAGAGTG AAAACCCACA 001680 001681 TCCTGAGAGT GTCAGAAACC CCAGGGAGGA GGCAGCTGTG CTGGCATGGA GGAGATGACA AAGATTATTA GATTGAAGAC 001760 001761 TTTCTCAGAA AATAACATTA AGTCACTAAA GAAAAGGAAC AATATAAATG TGTATTTGAG AAATTTTAAT TATTTGAAAG 001840 001841 ATTTTTCATA CAACATTTAT TCTGTAAGCA AATTTCAGGG ATTGAATTAA TAAAACTGAT ACAGAACTTC CTTTGTAGGT 001920 001921 ATCTTTGTAA ACATCAATTT CTGAATCACT GTTGTAAATA TTTTGGAACA CACAAATGAA TCAAATTTTA ACTCTACTTT 002000 002001 TATCTCTATT TTAAAAATGC CCCCCAAAAC CTCATTTTGT GCATGTAGCA TTTTGAATTC CCACCATCAA TGCATGATGG 002080 002081 TTCTTGATTT TCCACATTCA TATTGCCATT TTTCATTATG AGAATTGTGT GTTTTAAACA TCCTAATAGG TGAGTAATGG 002160 002161 TATCTAATTT TTATTTACAC GTACATGTCC CTAATAAAAA GTTCCTACTT AAAAATGTTC AAATAATCTT TGGTGAGGTA 002240 002241 CCTTGCCTGA GA |
Predicted Small Protein
Name | NONHSAT040736_smProtein_83:358 |
Length | 92 |
Molecular weight | 9741.1733 |
Aromaticity | 0.0659340659341 |
Instability index | 77.4572527473 |
Isoelectric point | 8.94854736328 |
Runs | 14 |
Runs residual | 0.0203754578755 |
Runs probability | 0.0439031468444 |
Amino acid sequence | MGGLTTRAFPSPVEQKAPARGPPCQHQGQIAQESVCSKAQEGCCLLSWSSVSCLRFRCPV PGAAAGVRSRTHEALRHCPPPVLCLGSFFYQ |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEHHHHLLLLEEEEEELLLLEEEEELLL LLLLLLLLLLLHHHHHLLLLLEEEELLEEEL |
PRMN | - |
PiMo | - |