NONHSAT041106
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT041106 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
609 nt |
Genomic location |
chr15+:25458606..25467437 |
Exon number |
6 |
Exons |
25458606..25458737,25459121..25459165,25462360..25462489,25463587..25463711,25464075..25464119,25467306..25467437 |
Genome context |
|
Sequence |
000001 ATGGTGAGCC TGGAGGAAGA TTTGCATTGG GCCCAATGGC CCTGGGCCAG TGTCTGTCAG CCAGTTTCCC AGCCCCTGGT 000080
000081 GCACTGAAGC TCAGGCCTTT CCTGGCATCC TGGCCTCCTG CACTGAGCTG TGTGAGTGCT TCTGCCCAGG CAGGCCACTT 000160 000161 GGCATTGACC GGTATAGATG GTGAGCCTGG AGGAAGATGT GTGGGACCCG CAGGCCGAGG GCCAGTGTCT CTCAGCCAGG 000240 000241 TGCTCAGCCC CCAGTGGGCT GAAACTCTGA CCCTTCCTGG CACCCTGCTC TCCTGCACTG TGCTGTGATG GTGAGACTTC 000320 000321 TGTTGGGCTT GCTTTTCCTG GGCCAGTGTC CATCAGCCAG GTGCTCAGCC ATCGGTGCGC TGAAGCTCCA GCCCTTCCTG 000400 000401 GTGCCCTGAT CTCCTGCACT GAGCTGTGAT GATGAGCTCT TTCACCTAGG AGGGCCCCTT GGCATTGACT GGCATAGATG 000480 000481 GTGACCCTGA AGAAAGACTT CAGTTGGGCC TGAAGGCCCC GGGCCAGTGT CCATCATCCA GGTGCTCAGC TCCCAGTGCA 000560 000561 CTGAAGCTCA GACCCTTCCT GGTTCCCTGG TCTCTTGCAC TGAGCTCTG |
Predicted Small Protein
Name | NONHSAT041106_smProtein_35:307 |
Length | 91 |
Molecular weight | 8982.3714 |
Aromaticity | 0.0444444444444 |
Instability index | 47.0744444444 |
Isoelectric point | 7.68792724609 |
Runs | 15 |
Runs residual | 0.0268077601411 |
Runs probability | 0.0473532355886 |
Amino acid sequence | MALGQCLSASFPAPGALKLRPFLASWPPALSCVSASAQAGHLALTGIDGEPGGRCVGPAG RGPVSLSQVLSPQWAETLTLPGTLLSCTVL |
Secondary structure | LLLLLEELLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHLHHHHLLLLLLLLLLEELLLL LLLEEEEEELLHHHHHHLLLLLLEEEEEEL |
PRMN | - |
PiMo | - |