NONHSAT041253

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT041253

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1095 nt

Genomic location

chr15+:28895794..28908585

Exon number

12

Exons

28895794..28895845,28896551..28896602,28896637..28896733,28899420..28899601,28900641..28900839,28900942..28901117,28901278..28901333,28902027..28902077,28902333..28902362,28903769..28903820,28903827..28903912,28908524..28908585

Genome context

Sequence
000001 CCAGCCCCTG CACAGCCCTC AGCAGAGGAT TCGGACACAG AGGACGACTC TGAAGCCGAA CAAACTGAAA GGAACATTCA 000080
000081 CCCCACTGCA ATGATGTTTA CCAGGCTGGA GTTCATGCTG AGATCATGCA GAGTGAAGCC ACCAAGACTT TATGCGGACT 000160
000161 GCTGCAAATG TTAGTGGAAA GCGGAATGAC GGACAAGACA TCTTCTCCAA ACAGGCTGGT GTACAGGGAG CAACACCGGA 000240
000241 GCTGGTGCAC GCTGGGGTTT GTGCAGAGCA TCGCTCTCAC GCTGCAGGTG TGCGGCGCCC TCAGCTCCCT GCAGTGGATC 000320
000321 ACGCTGCTCA TGAAGGTCGT GGAAGGGCAC GCACCCTTCA CTGCCACCTC GCTGCAGAGG CAGAGTCCAT GCTGAGGTGG 000400
000401 CGCAGGGTGT GCCCGCAGGC CTCGCTGACT GCCACCCACA GCAGCACACT GGTGGAGGAG GTGGTGGCAC TGCTGCACAC 000480
000481 GCTGCACTCC CTGACTCAGT GGAATGGGCT CATCAACAAG TACATCAACT CCCAGCTCCG CTCCATCACC CACAGCTTTG 000560
000561 CGGGAAGGCC TTCCGAAGGG GTGCCCAGTT AGAGGACTAC TTCCCCGACT CCGAGAACCC TGAAGTGGGG GGCCTCATGG 000640
000641 CGGTCCTGGC TGTGGTTGGA GGCATCGATG GTCGCCTGCG CCTGGGTGGC CAAGTTGTGC ACGATGACTT TGGAGAAGTC 000720
000721 ACCATGACTC GCATCACCCT GAAGGGCAAA ATCACCGTGT TTGCCTTCCA GGAAGCTGTG TGAGCTTGTG CTTCTGTGGT 000800
000801 AAGCAGGGCC TGTCGAATAT ATACATGTTG TAGAAAACTT GAAGTATATA GAAAATATCT GAGAACTCCC TGCCGTGGCC 000880
000881 TTTAATGTGA ACAACGACAA GTGGACCTGG ACCTGCTGCG GTGCCAGCAG TTGAAGCTAT ACATCCTAGG TCGGGCGCTG 000960
000961 TTCTCCCACC AGGATAAACT GCGGCAGATC CTGTCTCAGC CAGCTGTTCA GGAGACTGGA AGTGTTCACA CAGATGATGG 001040
001041 AGCAGTGGTA TCACCTGACC TTGGGGACAT GTCTCCTGAA GGGCCGCAGC CCCCC
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Predicted Small Protein

Name NONHSAT041253_smProtein_125:394
Length 90
Molecular weight 9844.3791
Aromaticity 0.0561797752809
Instability index 66.6629213483
Isoelectric point 8.47625732422
Runs 9
Runs residual 0.0420797532496
Runs probability 0.0503837170504
Amino acid sequence MQSEATKTLCGLLQMLVESGMTDKTSSPNRLVYREQHRSWCTLGFVQSIALTLQVCGALS
SLQWITLLMKVVEGHAPFTATSLQRQSPC
Secondary structure LLHHHHHHHHHHHHHHHHHLLLLLLLLLLLEEEEELLLLHHHHHHHHHHHHHHHHHHHHH
HHHHHHHHHHHHHLLLLLLLLLHHHLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHH
HHHHHHLLLLLLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTT
TTTTTTooooooooooooooooooooooo