NONHSAT041422
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT041422 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
1056 nt |
Genomic location |
chr15+:31327981..31329566 |
Exon number |
2 |
Exons |
31327981..31328125,31328656..31329566 |
Genome context |
|
Sequence |
000001 TTTCCAACTG GACTGACTCA TTGAGAGGAA ACCTTCACTG CACCTCACCA GTGCAGACAG AAGACCTGGA GGCAGGACGG 000080
000081 GAGGCATTTT ATACTTCAGC ACGATATGGG CCCTGACTTT TCATTTTCTA CATGGAGACA TATTGATCCT GCCTCCCAAG 000160 000161 CCTATAAGCT TTACCAGGAG AGAGGCAGGC CCCACCCCAA GATCCACTAT CCACTCTTTG AAGAAAGATT AGAGCCATgt 000240 000241 tctcagactt tgggctgcat cctaatccct gcgaagctgc acaatgtgtg atgactccac cctccacccg atccagaggg 000320 000321 tctggggtga gacccaagGC TGAGAGGCCT CGATGGCTTC CTGGCCCCAT CTCCGGCAGC AGCCTCTATG GCTGGGCTCT 000400 000401 CCTGCAGGCT GGGTGCACCC CAGGCCCTCA GATGGTTCTA ACCAGAATCG ATGGGCAGCA GTGACTTCGA CTGTATCATC 000480 000481 AATCTTGGCT GCCACAAGGT TGGGTGTCCA GGCCCTCAGC TGACCCTTGA GGTGGGCCCC CACACAGAGC TTTGCTCTGC 000560 000561 CCCCAGCCCA CCCTCATTCA TCGCCCAGAC CACGGCCAGG GACCCAGCTC CTCATGTCCC ATACCCTGCT CTCACCTCAT 000640 000641 CACCAGTGCA ACCACAGCAC CGAGGCCTGC CTGGCGGGGG CTGTGGCTTG ATGCTTGGGA TTTCATGAGA AGTCTCTCTC 000720 000721 CTCCCGACTG ACGTGGTTGC ACAAGCCACA GTGTGCCTGG CCACCCCCAC TGGGACCGCC TGCAGCTCGG CCATTTCCCC 000800 000801 CAGAGGCGCT CTGATCTGCC CTCCTGCCTC CTCTCCTGTT CTTGTTAGTA GAGAGCCACA CTCTGGGAGC TGTGTAGACC 000880 000881 CAGGGCCTCA GAGAGGGCTG GAGGATGGCT TGCCAGCCAA GCGGGTCAGT TTGGTGAGCA CTTCAGAATG AGACGCCTTG 000960 000961 ATTTGTTTCC CTATTCCAAG AGTTTACCAT CTGGATTTAG CCATGCCCTT GTAATGACCC CACCAATTTC ATGAAAAATG 001040 001041 GAATCTGTGA ATTTGC |
Predicted Small Protein
Name | NONHSAT041422_smProtein_236:463 |
Length | 76 |
Molecular weight | 8053.1635 |
Aromaticity | 0.0666666666667 |
Instability index | 48.012 |
Isoelectric point | 9.14788818359 |
Runs | 9 |
Runs residual | 0.0289361702128 |
Runs probability | 0.0444856621327 |
Amino acid sequence | MFSDFGLHPNPCEAAQCVMTPPSTRSRGSGVRPKAERPRWLPGPISGSSLYGWALLQAGC TPGPQMVLTRIDGQQ |
Secondary structure | LLLLLLLLLLHHHHLEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHLLL LLLLLEEEEEELLLL |
PRMN | - |
PiMo | - |