NONHSAT041478
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT041478 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
840 nt |
Genomic location |
chr15+:32404527..32460308 |
Exon number |
7 |
Exons |
32404527..32404564,32446109..32446187,32449810..32449976,32450614..32450807,32451771..32451856,32455428..32455536,32460142..32460308 |
Genome context |
|
Sequence |
000001 TTGTGCATTG GAGAGTTCTG TGGCAGAGAT GGCTGCAGGC TGATGAGCGC TTTGACGCCA CATTCCACAC TAACGTGTTG 000080
000081 GTGAATTCTT CTGGGCATTG CCAGTACCTG CCTCCAGCAT ATTCAAGAGT TCCTGCTACA TCGATGTACG CTGGTTTCCC 000160 000161 TTTGATGTGC AGCACTGCAA ACTGAAGTTT GGGTCCTGGT CTTACGGAGG CTGGTCCTTG GATCTGCAGA TGCAGGAGGC 000240 000241 AGATATCAGT GGCTATATCC CCAATGGAGA ATGGGACCTA GTGGAATCCC CGGCAAGAGG AGTGAAAGGT TCTATGAGTG 000320 000321 CTGCAAAGAG CCCTACCCCG ATGTCACCTT CACAGTGACC ATGCGCCGCA GGACGCTCTA CTATGGCCTC AACCTGCTGA 000400 000401 TCCCCTGTGT GCTCATCTCC GCCCTCGCCC TGCTGGTGTT CCTGCTTCCT GCAGATTCCG GGGAGAAGAT TTCCCTGGGA 000480 000481 TAACAGTCTT ACTCTCTCTT ACCGTCTTCA TGCTGCTCGT GGCTGAGATC ATGCCCGCAA CATCCGATTC GGTACCATTG 000560 000561 ATAGCCAGTA CTTCGCCAGC ACCATGATCA TCGTGGGCCT CTCGGTGGTG GTGACAGTGA TCGTGCTGCA GTACCACCAC 000640 000641 CACGACCCCG ACGGGGGCAA GATGCCCAAG TGGCCAGAGT CATCCTTCTG AACTGGTGCG CGTGGTTCCT GCGAATGAAG 000720 000721 AGGCCCGGGG AGGACAAGGT GCGCCCGGCC TGCCAGCACA AGCAGCGGCG CTGCAGCCTG GCCAGTGTGG AGATGAGCGC 000800 000801 CGTGGCGCCG CCGCCCGCCA GCAACGGGAA CCTGCTGTAC |
Predicted Small Protein
Name | NONHSAT041478_smProtein_509:586 |
Length | 26 |
Molecular weight | 2511.9481 |
Aromaticity | 0.0 |
Instability index | 90.976 |
Isoelectric point | 3.66571044922 |
Runs | 4 |
Runs residual | 0.0483018867925 |
Runs probability | 0.00128069245716 |
Amino acid sequence | MLLVAEIMPATSDSVPLIASTSPAP |
Secondary structure | LEEEHHHLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |