NONHSAT041478

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT041478

Source

NONCODE4.0

Same with

,

Classification

sense

Length

840 nt

Genomic location

chr15+:32404527..32460308

Exon number

7

Exons

32404527..32404564,32446109..32446187,32449810..32449976,32450614..32450807,32451771..32451856,32455428..32455536,32460142..32460308

Genome context

Sequence
000001 TTGTGCATTG GAGAGTTCTG TGGCAGAGAT GGCTGCAGGC TGATGAGCGC TTTGACGCCA CATTCCACAC TAACGTGTTG 000080
000081 GTGAATTCTT CTGGGCATTG CCAGTACCTG CCTCCAGCAT ATTCAAGAGT TCCTGCTACA TCGATGTACG CTGGTTTCCC 000160
000161 TTTGATGTGC AGCACTGCAA ACTGAAGTTT GGGTCCTGGT CTTACGGAGG CTGGTCCTTG GATCTGCAGA TGCAGGAGGC 000240
000241 AGATATCAGT GGCTATATCC CCAATGGAGA ATGGGACCTA GTGGAATCCC CGGCAAGAGG AGTGAAAGGT TCTATGAGTG 000320
000321 CTGCAAAGAG CCCTACCCCG ATGTCACCTT CACAGTGACC ATGCGCCGCA GGACGCTCTA CTATGGCCTC AACCTGCTGA 000400
000401 TCCCCTGTGT GCTCATCTCC GCCCTCGCCC TGCTGGTGTT CCTGCTTCCT GCAGATTCCG GGGAGAAGAT TTCCCTGGGA 000480
000481 TAACAGTCTT ACTCTCTCTT ACCGTCTTCA TGCTGCTCGT GGCTGAGATC ATGCCCGCAA CATCCGATTC GGTACCATTG 000560
000561 ATAGCCAGTA CTTCGCCAGC ACCATGATCA TCGTGGGCCT CTCGGTGGTG GTGACAGTGA TCGTGCTGCA GTACCACCAC 000640
000641 CACGACCCCG ACGGGGGCAA GATGCCCAAG TGGCCAGAGT CATCCTTCTG AACTGGTGCG CGTGGTTCCT GCGAATGAAG 000720
000721 AGGCCCGGGG AGGACAAGGT GCGCCCGGCC TGCCAGCACA AGCAGCGGCG CTGCAGCCTG GCCAGTGTGG AGATGAGCGC 000800
000801 CGTGGCGCCG CCGCCCGCCA GCAACGGGAA CCTGCTGTAC
[back to top]

Predicted Small Protein

Name NONHSAT041478_smProtein_509:586
Length 26
Molecular weight 2511.9481
Aromaticity 0.0
Instability index 90.976
Isoelectric point 3.66571044922
Runs 4
Runs residual 0.0483018867925
Runs probability 0.00128069245716
Amino acid sequence MLLVAEIMPATSDSVPLIASTSPAP
Secondary structure LEEEHHHLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -