NONHSAT041483
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT041483 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2368 nt |
Genomic location |
chr15-:32618370..32635000 |
Exon number |
3 |
Exons |
32618370..32620479,32631562..32631618,32634800..32635000 |
Genome context |
|
Sequence |
000001 ACAAGAGCTC GGCCAGGCGG CCCCGCGGGG TGGTCGTGGC CATGACAGCG GCTCCAGACG GCTCCCCTTC CACGCCCTTC 000080
000081 CCGCCGGAGA TGAGGGGAAG ATGTCTGTGT CAAGATTCAA GGCCAAACTG AAGTTGCTGG CGTCTATCTT CCACGAGAAC 000160 000161 CAGGAGGCTC AGCTGCGGCT CACGCTCCAC TGCAACATGA GAATGGGACA ACAGAAGAAG TGACTTCAGA GGAAGAGGAA 000240 000241 GAAGAGGAGA TGGCTGAAAC ATATAGGAGG TCCAGGCAGC ATGAACAGCT CCCTGGTCAG AGACACATGG ATTTGCTCAC 000320 000321 TGGTTACTCA AAGCTGATTC AAAGCCGATT AAAGCTGCTG CTTCATCTGG GGTCCTAACC TCCAGTGGGA AAAACATTCT 000400 000401 TCTTTTCCTG CTGGTGTCAC CCACTGTTCC ACGGATCCAA AACAACACCC AATGTTTGGT ACAAATTTAG TGAAACAGCT 000480 000481 CTTTCCATTC TTAACTCATG CCAAGCATCT CAGCTTGGGG TCAGGAAAAT GCCAGGGGAC ATGAGCTCTT CTCCTAGAGT 000560 000561 TAGAGAATTC TCTGCCTTAG TTGCAATAAA GGAAAAGATA CACATTCTTC CTACAAATGC CAAAGTAGGC TCAAAACTTG 000640 000641 GTTCCTAGAG TAGAGTATTG AAGTCGTGGC AAAGATCTTT CCAGTGATCA AAGCAGTGGC TCGTTATGTT CCCTCAGACT 000720 000721 GAAGCTACAG TCTCATCTTC ACTTTCTGTT AGCTCCCTCC ATCCTCTGCG TAGGCCCACA CCTGCTTCTT ACAGTTGTGT 000800 000801 GGATTATAGC ACCTCCTCTC CAGCCTCAGG ACCTTTGTGA GTGCTGCTCC TTCTTCCTTG ACTGCTCTTC ACCAGGGATC 000880 000881 CTCAGGGCAC AGCCCTTACC TCCTGCAAGT CTTGACTTAA ATGTCACTTT CTCAGGGAGG CCCACACTCA TCACCATTTC 000960 000961 ACACCCACCT CCCACATGAC CTTATTTTAC CTGTTCTCTC TTCTCCTCTT TTTTTTAGAG TACTTATGAT CTCATGTGGT 001040 001041 ACATTTTGGG GTTTTTGGTT CTTCTGTATC CGCCACTGCC ATGATCAGTT AGAATGTTGG AAATCAAGGA AACTTGGTTT 001120 001121 TTTGGCCTGT GATGAAAACT ATGGGGTCTA ATAGTATCTG ATAAAGTGGC AGACCCTCAA TTATTATTTG CTGAGTAAAT 001200 001201 GAATGAAGGT GTGTAGACAA CTAGCTCTAG AAGCTTAAAT GAGTGATACC ATGTTTTATA ATATTGGAAG AGGCCGGGAA 001280 001281 TGGTGGCTCA CGCCTGTAAT CTCAGCATTT TGGGAGGCCA AGGTGGATGG ATCTCTTGAG GTCAGGAGTT TGAGACCAGC 001360 001361 CTGGCCAACA TGGTGAAACC TTGTCTCTAC TAAAAATGCA AAAATTAGCT GGACGTGGTG GCACACGCCT GTAATCCCAG 001440 001441 CTACTCTGGA GGCTGAGGCA CAGCATCACT TGAACCCAGG AGGCAGAGGT TGCAGTGAGC TGAGATGGTG CCACTGCACT 001520 001521 CCAGCCTGGG CAACAGAGTG AGACTCTGTC TCCAAAAACA GAAAAAAGAA AGGGGGGGAA GAAAAGAAGA AGAAGGAAGA 001600 001601 GGAAAGGGAG GAGGAGGATT TATCATTCAC TTACACTAGA AACAGTGAAA ATAGATAATA GCTATAATTT ACTCACATCT 001680 001681 TATCTAAAAC ACAAATTCAG GGTAATTTAT GAGCAAGTCA TTTTCCAGTG GGCTTTCGAT AGTGTGTGAA TTTGGAATGA 001760 001761 ATGCTGGTAC TTCCAGCTCC CTTCCACCTG CAGCACCAGG AAGCCATTGT TGTGGGGAGG CCACCAACTT GGCTGGCATG 001840 001841 TTGCTTCTGC CTCAGTTAGT GATGATGGTG ATTTGGAGAG AAAGGACACT CTGCTAGGCT CCAAATCCAA AGGATCAAGT 001920 001921 GGATAAATGA AATGAATATC TAAATAAATA TCAATTAGGT CAAAAGTTTG TTTTCATCTA AATGAAATCT GAACACTACT 002000 002001 TAGGGCTATG AAACATAGCC AGAGGACATG GCCAGCTCTG GAGTGGGGCC TGGACTTGCT CTCCCCTGCT GGAAGTGCTT 002080 002081 TTCCTCCCAG AGCTCAGAGC ACCATGTGCG TGTGACCCCT GCCTTTTCAC AGGCCATTGC CACAGGGCAT CTCCCTGGTC 002160 002161 CACCCGCCCC AAGATGAGCC AGCCTCCCAC TCAGGAATTG GGTGGGGAAG GGAAAGAAAG ACAGAGGAGA GAGAGACAGT 002240 002241 CACACACAGG CAGTGGAGCT CCCCTGCACC CACCAGGGAG CTTGAGCAGC TCATCTGCAG AGCAGGGAAA CATTTTTACT 002320 002321 ACCATTGGGA AGACGCTGAG CAGAGAGGTG AGGGGACAGC ATTTCTTG |
Predicted Small Protein
Name | NONHSAT041483_smProtein_920:1150 |
Length | 77 |
Molecular weight | 8783.1335 |
Aromaticity | 0.157894736842 |
Instability index | 75.8868421053 |
Isoelectric point | 6.98895263672 |
Runs | 10 |
Runs residual | 0.00983061101028 |
Runs probability | 0.0432432432433 |
Amino acid sequence | MSLSQGGPHSSPFHTHLPHDLILPVLSSPLFFRVLMISCGTFWGFWFFCIRHCHDQLECW KSRKLGFLACDENYGV |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLEELLLLLLLEEEEEEEELLLHHHHHHHHHHHHHHHHHHE ELLLLLEEEELLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL LLLLLLLLLLLLLLLL |
PiMo | oooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiii iiiiiiiiiiiiiiii |