NONHSAT041680
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT041680 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
547 nt |
Genomic location |
chr15-:37186619..37187503 |
Exon number |
2 |
Exons |
37186619..37187013,37187352..37187503 |
Genome context |
|
Sequence |
000001 TTTCTTCTTT CTCCTCTGTG TCCTCGAATG ACCACAATCA GGTTTTCTTC TTGATCCTTC AGTGAGCCAA GGAGCAGCAT 000080
000081 ATAGTCCAGA GGGTCAGCCC ATGGGGAGCT TTGTGTTGGA TGGTCAGCAA CACATGGGGA TCCGGCCTGC AGGACCTATG 000160 000161 AGTGGAATGG GCATGAATAT GGGCATGGAT GGGCAATGGC ACTACATGTA ACCTTCATCA TGTAAAGCAA TCGCAAAGCA 000240 000241 AGGGGGAAGT AAGTACAGTC GGGTGCGATC TGTCTTCACT ATCACTTCAG AGACtttatt ttatttttta taatttGCCC 000320 000321 CCATTTTATT TTTCCTTGCC CATAACTGCA TGCCTTTCCA AACTAAGGAC CTGTTTTTAA ATATATATCA CCCATCTCTG 000400 000401 AAGTCACAGA TGACACTGAT GTGCACTTTT GAAAAGGCCA ACTGACAAGC CTGCGTGTGT TTTAAGCAGG TGGGACTGCC 000480 000481 TTTTAGCCTA TTTACTGTGG CCCCAATGTG CACAAACACA GACATCAGGC AGATATTGGA CATTTAA |
Predicted Small Protein
Name | NONHSAT041680_smProtein_188:379 |
Length | 64 |
Molecular weight | 7064.1284 |
Aromaticity | 0.126984126984 |
Instability index | 66.7780952381 |
Isoelectric point | 8.83734130859 |
Runs | 13 |
Runs residual | 0.0613864593456 |
Runs probability | 0.0361447420272 |
Amino acid sequence | MGNGTTCNLHHVKQSQSKGEVSTVGCDLSSLSLQRLYFIFYNLPPFYFSLPITACLSKLR TCF |
Secondary structure | LLLLLEELLLEEELLLLLLEEEEEELLLLHHHHHHHHHHHHLLLLLEELLLHHHHHHHHH HLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLL LLL |
PiMo | oooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiii iii |