NONHSAT041689
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT041689 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1074 nt |
Genomic location |
chr15+:37546080..37547153 |
Exon number |
1 |
Exons |
37546080..37547153 |
Genome context |
|
Sequence |
000001 acCATAGAGA ATGTGACATG GACGCGGACA GTTTTGGCTG ATGTGAAAGT TCACATCTTT GGCTCCTTCC AAAACATCAA 000080
000081 GATGGCAAGA ACTGCCGTTT GCAACCTAAT CTTGGGAAAT CCTCCTTCCA AGGTTTATGG CAATATACGA GCTGTGGCTA 000160 000161 GCAGATCAGC AGATCGGTTC TGATTTCAAG TCAGAGACTT TTTATCTTGC CTTTGGACTC TGGAGAAAAA TACTTTCTTT 000240 000241 ACGAGTGGTC ACAAGAAACC ATCTGAAGAA TTTCAGTCAT TTGAAGCCTC CGTCTCTTTT TCTATTCTCA GCTAGAAGCA 000320 000321 TAAACAAAAA AGGAAGGTTT AAGAGTATTC ACACTCAATA GGTTTTAGGa taatttaaat ataaaaaatt GATTCTATTA 000400 000401 TACTTACACA TTAGGTATAA TTTATGATTT CTTTATTTAA AATCACATGT AGCAGATTGC ATCATTTATA ATCCTCTCAG 000480 000481 AGGGAAACTT CTTGTTTAAA CAGCTCTATG TGaatttata cttttatatt tataaattta aaaccataaa aatttataaa 000560 000561 CGTTTCTTCT TTATAAATTG CAATTTAATA GATTATTTCA GAAAAACCTC TTGGAATGAT GACCTTCCTT AATACTGGGT 000640 000641 GATATGTGAA TATTTTTTTG TAGGGGAatg ggatctcacc ttgtcaccca ggctggggtg cagtggtgca aactcagctc 000720 000721 actgtagcct ctacctcctg ggttcaagtg atcctcctgc ctcagcctcc ctagtagctg ggactagagg tgtgcaccac 000800 000801 ctgcctgggt aattttttgt attttttgta gagatggggt ttcaccatgt ttgtcaggct ggtctcgaat tcctgacctc 000880 000881 aagggatctg ctcgacttgg cctcccaaag tgccgagatt acaggcatga gccaccgcac ccagccTTGA TGTGTGGAAT 000960 000961 ATTTGAGAGG TCATAAGCAG TGGTTTTGGT GATACTATAC TATATGAATC AGTAAGAGCT CATCTTAGAA CCTGTTTTGC 001040 001041 AGTTTTAAAA ATTAAAGacc tacatcatag ggtt |
Predicted Small Protein
Name | NONHSAT041689_smProtein_833:949 |
Length | 39 |
Molecular weight | 4185.6778 |
Aromaticity | 0.0526315789474 |
Instability index | 46.9342105263 |
Isoelectric point | 5.73785400391 |
Runs | 6 |
Runs residual | 0.014716066482 |
Runs probability | 0.0260113054231 |
Amino acid sequence | MGFHHVCQAGLEFLTSRDLLDLASQSAEITGMSHRTQP |
Secondary structure | LLLEEHHHLLLLLLLLHHHHHHHHHHHHHHLLLLLLLL |
PRMN | - |
PiMo | - |