NONHSAT041689

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT041689

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1074 nt

Genomic location

chr15+:37546080..37547153

Exon number

1

Exons

37546080..37547153

Genome context

Sequence
000001 acCATAGAGA ATGTGACATG GACGCGGACA GTTTTGGCTG ATGTGAAAGT TCACATCTTT GGCTCCTTCC AAAACATCAA 000080
000081 GATGGCAAGA ACTGCCGTTT GCAACCTAAT CTTGGGAAAT CCTCCTTCCA AGGTTTATGG CAATATACGA GCTGTGGCTA 000160
000161 GCAGATCAGC AGATCGGTTC TGATTTCAAG TCAGAGACTT TTTATCTTGC CTTTGGACTC TGGAGAAAAA TACTTTCTTT 000240
000241 ACGAGTGGTC ACAAGAAACC ATCTGAAGAA TTTCAGTCAT TTGAAGCCTC CGTCTCTTTT TCTATTCTCA GCTAGAAGCA 000320
000321 TAAACAAAAA AGGAAGGTTT AAGAGTATTC ACACTCAATA GGTTTTAGGa taatttaaat ataaaaaatt GATTCTATTA 000400
000401 TACTTACACA TTAGGTATAA TTTATGATTT CTTTATTTAA AATCACATGT AGCAGATTGC ATCATTTATA ATCCTCTCAG 000480
000481 AGGGAAACTT CTTGTTTAAA CAGCTCTATG TGaatttata cttttatatt tataaattta aaaccataaa aatttataaa 000560
000561 CGTTTCTTCT TTATAAATTG CAATTTAATA GATTATTTCA GAAAAACCTC TTGGAATGAT GACCTTCCTT AATACTGGGT 000640
000641 GATATGTGAA TATTTTTTTG TAGGGGAatg ggatctcacc ttgtcaccca ggctggggtg cagtggtgca aactcagctc 000720
000721 actgtagcct ctacctcctg ggttcaagtg atcctcctgc ctcagcctcc ctagtagctg ggactagagg tgtgcaccac 000800
000801 ctgcctgggt aattttttgt attttttgta gagatggggt ttcaccatgt ttgtcaggct ggtctcgaat tcctgacctc 000880
000881 aagggatctg ctcgacttgg cctcccaaag tgccgagatt acaggcatga gccaccgcac ccagccTTGA TGTGTGGAAT 000960
000961 ATTTGAGAGG TCATAAGCAG TGGTTTTGGT GATACTATAC TATATGAATC AGTAAGAGCT CATCTTAGAA CCTGTTTTGC 001040
001041 AGTTTTAAAA ATTAAAGacc tacatcatag ggtt
[back to top]

Predicted Small Protein

Name NONHSAT041689_smProtein_833:949
Length 39
Molecular weight 4185.6778
Aromaticity 0.0526315789474
Instability index 46.9342105263
Isoelectric point 5.73785400391
Runs 6
Runs residual 0.014716066482
Runs probability 0.0260113054231
Amino acid sequence MGFHHVCQAGLEFLTSRDLLDLASQSAEITGMSHRTQP
Secondary structure LLLEEHHHLLLLLLLLHHHHHHHHHHHHHHLLLLLLLL
PRMN -
PiMo -