NONHSAT041951
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT041951 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
597 nt |
Genomic location |
chr15-:41828851..41836464 |
Exon number |
2 |
Exons |
41828851..41829399,41836417..41836464 |
Genome context |
|
Sequence |
000001 GCGATCTCTG CGGGGCAAGA TGGCGGCGCC CAGACAGGCC TGGAGCACGG ATGAATAAGA GGGAACCCCC ACACGGAGAC 000080
000081 ACTGCTGGAG AGAGTCGTAC TGGGGAGGCA GCTGGAGCAG CAAGATGCTG TCGAGACCGA AGCCAGGGGA GTCCGAGGTG 000160 000161 GACCTGCTGC ACTTCCAGAG TCAGTTTCTC GCAGCTGGTG CAGCCCCAGC AGTGCAGTTG GTGAAGAAAG GAAATAGGGG 000240 000241 CGGTGGTGAT GCCAACTCAG ACCGGCCTCC GCTCCAGGAC CATCGGGATG TGGTGATGTT GGACAGTGAG TTCCCATGGA 000320 000321 TGTGAGGCTG AGAAGTAGAG AGGGTACAGC CTCGGGCCCC TCCCTCTTCC TGTTGTGGTT GGATTCAGAC ACATCATTAT 000400 000401 TATTTCAGAC ACTGCATAGC CTGTGTTTCT GCAGccccat tttacagagg aagaaaatga ggctcaaaga ggttaaatat 000480 000481 cttacccaag atgacacagc ttgagccagg gccccatggc agctgtcttt cttccctagc ctgcagtgtc ttcctaGGAA 000560 000561 GGTGTGCATA TACTCACGTT TGGGATCTTT TCTTTCT |
Predicted Small Protein
Name | NONHSAT041951_smProtein_50:223 |
Length | 58 |
Molecular weight | 6269.8794 |
Aromaticity | 0.0526315789474 |
Instability index | 67.9877192982 |
Isoelectric point | 8.80657958984 |
Runs | 8 |
Runs residual | 0.0135964912281 |
Runs probability | 0.0475843490549 |
Amino acid sequence | MNKREPPHGDTAGESRTGEAAGAARCCRDRSQGSPRWTCCTSRVSFSQLVQPQQCSW |
Secondary structure | LLLLLLLLLLLLLLLLLHHHHHHHEEELLLLLLLLLEEEEEEEEEEEEEELLLEELL |
PRMN | - |
PiMo | - |