NONHSAT042011

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT042011

Source

NONCODE4.0

Same with

,

Classification

sense

Length

736 nt

Genomic location

chr15-:42714156..42716996

Exon number

4

Exons

42714156..42714186,42714699..42714818,42716196..42716258,42716475..42716996

Genome context

Sequence
000001 ACAAATAGAA GGGTTTTGAg gccaggcgag gtggctcacg tctgtagtcc cagcactttg ggagggtgag gcagggggat 000080
000081 cgcttgagct cagaagttcg agaccagcca gggcaacatg gcaaaactcg atctctacaa aaaaatacaa aaattagcgg 000160
000161 gatgttgtgg tgtgcacctg tactacttat gaggctgagg tgggagaatc acttgagcac caaagatcga ggctgcagtg 000240
000241 agccatgatt gtgccactgt actctagcat gggcaacaga gtgagacctt gactcaagca aagcaaaaca aaacaaagaa 000320
000321 GGGTTTTAAA TGGCATTTCC CGTGTTGTCT CATGCATCAT TTAGAAGCAC CACCTTGGAA AGAGCAAGGA GATTGCAAAC 000400
000401 CTTTTCTTTA CACCAACATC ACCAAGTGAT GCACTTTCAT TTGAGAAACA ATGAGTGTAT TTTGTTATAC TGTGGGTATA 000480
000481 CTCGAATGCC CTTCTAGGCT GCTTCATAAT CATTCTGGAA AGGTGGTGAA TGATCTCGTG TTCAGTGGCT CCAGTGATCA 000560
000561 GTCAGTCCAT GCTCACAACA TTCACACTGG TGAGCTCGTG CGGATCTATA AAGGTCACAA TCATGCAGTG ACTGTGGTGA 000640
000641 ATATCCTAGG AAAAGTGATG GTGACTGCTT GCCTGGATAA ATTTGTTCGT GTCTATGAAT TACAGTCTCA TGATCGATTA 000720
000721 CAAGTTTATG GAGGAC
[back to top]

Predicted Small Protein

Name NONHSAT042011_smProtein_329:496
Length 56
Molecular weight 6631.6383
Aromaticity 0.127272727273
Instability index 78.4381818182
Isoelectric point 10.075012207
Runs 10
Runs residual 0.030303030303
Runs probability 0.0303479950539
Amino acid sequence MAFPVLSHASFRSTTLERARRLQTFSLHQHHQVMHFHLRNNECILLYCGYTRMPF
Secondary structure LLLLLLLLLLLLLLHHHHHHHHHHHLHHHHHHHHEEEELLLLEEEEEELEEELLL
PRMN -
PiMo -