NONHSAT042011
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT042011 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
736 nt |
Genomic location |
chr15-:42714156..42716996 |
Exon number |
4 |
Exons |
42714156..42714186,42714699..42714818,42716196..42716258,42716475..42716996 |
Genome context |
|
Sequence |
000001 ACAAATAGAA GGGTTTTGAg gccaggcgag gtggctcacg tctgtagtcc cagcactttg ggagggtgag gcagggggat 000080
000081 cgcttgagct cagaagttcg agaccagcca gggcaacatg gcaaaactcg atctctacaa aaaaatacaa aaattagcgg 000160 000161 gatgttgtgg tgtgcacctg tactacttat gaggctgagg tgggagaatc acttgagcac caaagatcga ggctgcagtg 000240 000241 agccatgatt gtgccactgt actctagcat gggcaacaga gtgagacctt gactcaagca aagcaaaaca aaacaaagaa 000320 000321 GGGTTTTAAA TGGCATTTCC CGTGTTGTCT CATGCATCAT TTAGAAGCAC CACCTTGGAA AGAGCAAGGA GATTGCAAAC 000400 000401 CTTTTCTTTA CACCAACATC ACCAAGTGAT GCACTTTCAT TTGAGAAACA ATGAGTGTAT TTTGTTATAC TGTGGGTATA 000480 000481 CTCGAATGCC CTTCTAGGCT GCTTCATAAT CATTCTGGAA AGGTGGTGAA TGATCTCGTG TTCAGTGGCT CCAGTGATCA 000560 000561 GTCAGTCCAT GCTCACAACA TTCACACTGG TGAGCTCGTG CGGATCTATA AAGGTCACAA TCATGCAGTG ACTGTGGTGA 000640 000641 ATATCCTAGG AAAAGTGATG GTGACTGCTT GCCTGGATAA ATTTGTTCGT GTCTATGAAT TACAGTCTCA TGATCGATTA 000720 000721 CAAGTTTATG GAGGAC |
Predicted Small Protein
Name | NONHSAT042011_smProtein_329:496 |
Length | 56 |
Molecular weight | 6631.6383 |
Aromaticity | 0.127272727273 |
Instability index | 78.4381818182 |
Isoelectric point | 10.075012207 |
Runs | 10 |
Runs residual | 0.030303030303 |
Runs probability | 0.0303479950539 |
Amino acid sequence | MAFPVLSHASFRSTTLERARRLQTFSLHQHHQVMHFHLRNNECILLYCGYTRMPF |
Secondary structure | LLLLLLLLLLLLLLHHHHHHHHHHHLHHHHHHHHEEEELLLLEEEEEELEEELLL |
PRMN | - |
PiMo | - |