NONHSAT042016

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT042016

Source

NONCODE4.0

Same with

,

Classification

sense

Length

647 nt

Genomic location

chr15+:42787832..42797886

Exon number

2

Exons

42787832..42787911,42797320..42797886

Genome context

Sequence
000001 AGGCGCGACT AGGGTGCAGC GCCAGGTCCG GTGTTGGGGT GTCCGAGTTG CCGCCGGAGA GGAGTGGCCT CGCCCGCTTG 000080
000081 acagtcttgc tctgttgccc aggctggagt gcagtgagtc ttggctcact gcagcctctg cctcccaggc tcaagccaca 000160
000161 gacgtgcact actgcactcg gctaattttt gtgttttctt tttagtagag ctggggtttc accgtattgg gcagtctggt 000240
000241 cttgaactac tggcctcaag tgatccgccc acctctgcct cccacagtgc tgggattaca ggcatgagcc accacgcctg 000320
000321 gccTGATGGT GATTTAAAGT GCTCTTTCTT CATTACTTCT TGAGTAGCTC ACCAGTTTTA CAAATGAAGC CACATGGATC 000400
000401 TTCCAAGGCC TTATTTAAAT TCCAGGGCCT TTTTTCTGTG TATTTCTTTC CAAGAAGCTC Atttactttt cctttcttct 000480
000481 tttcttctct tttcttttac ttcctttCTG CTTGCAtttt tttttttttt ttttgagacg gagtcttgct gttgcccagg 000560
000561 ctgaagtaca gtggcatgat ctcggctcac tgcgaccttt gcctctcggg ttcaatcaac tctcctgtct cagcctcctg 000640
000641 agtagct
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Predicted Small Protein

Name NONHSAT042016_smProtein_383:535
Length 51
Molecular weight 6044.0454
Aromaticity 0.4
Instability index 49.8722
Isoelectric point 9.86492919922
Runs 9
Runs residual 0.0153216374269
Runs probability 0.0335433472688
Amino acid sequence MKPHGSSKALFKFQGLFSVYFFPRSSFTFPFFFSSLFFYFLSACIFFFFF
Secondary structure LLLLLLHHHHHHHLLLEEEEEELLLLEELHHHHHHHHHHHHHHHHHHHHL
PRMN LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTTToooooo