NONHSAT042174
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT042174 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
879 nt |
Genomic location |
chr15-:44877850..44883135 |
Exon number |
3 |
Exons |
44877850..44878048,44881450..44881612,44882619..44883135 |
Genome context |
|
Sequence |
000001 GTCTTCTAAA ACCTACGTCA CAGCCAAAAA GCCCTGCATG TTAAACTTAC CTTCAGAATG ACTTTTATGG TGTGTTCAGA 000080
000081 AGTATACAGG AAGTATTCAG CCAAGACTAG GGCCTAACTC AGCACTAGGC ACAGAGGTAC TGAATTATAA GTTTTTGGTG 000160 000161 CCTATTAACA TATACGTGTT TTGAAACCCG GCAGTTAAGT TTCTATTCCA CCAAAACGCC CAGTATTTTT TGTGATTATG 000240 000241 TTGTATGAAG TCTAGAGTGA ACTACGAGAC TATAGTGACT GAGAACCAAA TATTAGTCTT CCAAAAATAA TACGAAGCAA 000320 000321 GAACCAAAGT AAAAATCAGG AATGAAGTCA CAAAAGAAGC ATCTGTTGGG CGCTATCAtc atagctgtaa tcccagcact 000400 000401 cagggaggca gaggtgggag aatggcttga ggccaggagt tcgaccagcc tgggcaacat agtgaagacc ctgttcttta 000480 000481 ccaacacaaa ggaaagaaaa aaaaaCAGCA GCAGCAGCTT AACACAGCAG CCACAAAGGT CCACCCTGTC ATCCCTGCCA 000560 000561 TGTGGCTGGA GGATCAGGTG TGTTTCCTTT TGAAGCTTAT GCTACAGCAG TGTAAGACCC AGTATGAGCT GGGGAAGCTT 000640 000641 TTACAGCTCT TTGTTGAAAG AGAGCATCTC TTCTCTGATG GTCCAGATGT GAAAAAGCTT TGCATCCTTT GCCAGATTTT 000720 000721 GAAGGATACA TCCATAGCCA TTAATCATAC AATTATTACC AGCTACAGCA TTGAGAATCT TCAGCATGAA TGTAGATCTA 000800 000801 TTTTGGAAAG ACTGCAGACA GATGGACAAT TCGCTTTGGC CAGGAGGGTA GCAGAATTAG CTGAGTTACC TGTGGACAA |
Predicted Small Protein
Name | NONHSAT042174_smProtein_341:592 |
Length | 84 |
Molecular weight | 9261.6718 |
Aromaticity | 0.0602409638554 |
Instability index | 43.5168674699 |
Isoelectric point | 10.3798217773 |
Runs | 12 |
Runs residual | 0.0045515394913 |
Runs probability | 0.0297356179709 |
Amino acid sequence | MKSQKKHLLGAIIIAVIPALREAEVGEWLEARSSTSLGNIVKTLFFTNTKERKKNSSSSL TQQPQRSTLSSLPCGWRIRCVSF |
Secondary structure | LLLHHHHHHLLHHHHLHHHHHHHHHHHHHHLLLLLLLLLHHHHEEEELLLLLLLLLLLLL LLLLLLLLLLLLLLLLEEEEEEL |
PRMN | - |
PiMo | - |