NONHSAT042246
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT042246 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
583 nt |
Genomic location |
chr15+:45709052..45710791 |
Exon number |
2 |
Exons |
45709052..45709597,45710755..45710791 |
Genome context |
|
Sequence |
000001 TTAGGGATAT GAGAGTCAAG ACTTTCTGTA GCCATATATC TCCACCGGTT GGTCATAAGT ATCTGTCTTT TTAAGTAGCC 000080
000081 TGTTTAAGGT GTAAGCCTTC ATTGGAGGCT CAGGTGCACT CAAGTCACCA GATGAGTGTT CTCCCCTTTG GGATAAGGCT 000160 000161 TTTCATAGGT TCTCATATGG AGAATGTTTC TCTTAGCTAC TCCCTTAGCC ATGCACACAA AGTAGCTCTT TGGTTAATGA 000240 000241 TTTGTTTCTG GGATATCTTG ATATCAAGAA GCTGGTCTGG AAAGCGGATA TAAGCATTCT GGTCCCAAGA AAAGGATATC 000320 000321 CCTATTTGAA TTTAAATAGA CCTTCTGATT TATAATTTTT AGAAAACTTA TTAACAACTG ATTGACATTA CTTTGTGTTG 000400 000401 TGTGTTTGCC CTCAGAGTTT CAAGAAGTTT TTAACCGAAG TGTCATGATT ATTGCAGCAA CAAATAGACC TGATGTGTTA 000480 000481 GATACTGCTT TGTTACGACC TGGAAGATTA GATAAGATCA TCTATATCCC ACCTCCAGAT CACAAGGGCA GGCTTTCTAT 000560 000561 TTTAAAAGTC TGTACAAAAA CCA |
Predicted Small Protein
Name | NONHSAT042246_smProtein_131:292 |
Length | 54 |
Molecular weight | 6135.2565 |
Aromaticity | 0.132075471698 |
Instability index | 51.9358490566 |
Isoelectric point | 9.77923583984 |
Runs | 7 |
Runs residual | 0.0281868384722 |
Runs probability | 0.0586090291973 |
Amino acid sequence | MSVLPFGIRLFIGSHMENVSLSYSLSHAHKVALWLMICFWDILISRSWSGKRI |
Secondary structure | LLLLLLLEEEEELLLLLLLLHHHLLHHHHHHHHHHHHHHHHHHHHHHLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLL |
PiMo | oooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiii |