NONHSAT042386
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT042386 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
591 nt |
Genomic location |
chr15+:49913266..49917718 |
Exon number |
3 |
Exons |
49913266..49913319,49915868..49915995,49917310..49917718 |
Genome context |
|
Sequence |
000001 GCTCGGGCGG AGCTGGAGAC GTGTGGAGCT GTTCGAGGAC TCGCGGGTGT GCAGggatgc ggtttaatat tttcatgtga 000080
000081 ttcctaaaag aatctgaggc tcaagaaaag AGGGCATCTT AATATCCTGC ACTTTCAGTC ATTGAGGGCA TGATCACAAA 000160 000161 GATCAAAGCC ATTTTTAGGC AGTGCACCTA TGATATGTGT TTTAGAAATA GCCGTTAAAC TTTGGTTTGA ATGAAGAATG 000240 000241 TCTCTCAATC CACCTATATT TCTCAAACGA AGTGAAGAAA ATAGTTCAAA ATTTGTGGAA ACAAAACAGT CACAAACTAC 000320 000321 TTCCATAGCT TCAGAAGATC CCCTTCAAAA CTTATGTTTA GCATCTCAAG AAGTTCTTCA AAAAGCTCAG CAAAGTGGGA 000400 000401 GATCAAAATG TCTCAAATGT GGTGGTTCCA GAATGTTCTA CTGCTATACA TGTTATGTTC CAGTTGAAAA TGTACCTATT 000480 000481 GAACAGATTC CACTTGTGAA GGTTAGTAAG AAATTTAATT GTTTGAAAGT ATGAAAATAG ATTTTTTAAA AACATCTCAT 000560 000561 GTATACCTAC TCTAATTGAT AAACTTAATA A |
Predicted Small Protein
Name | NONHSAT042386_smProtein_353:466 |
Length | 38 |
Molecular weight | 4422.1978 |
Aromaticity | 0.162162162162 |
Instability index | 88.3108108108 |
Isoelectric point | 9.62652587891 |
Runs | 5 |
Runs residual | 0.0446317877511 |
Runs probability | 0.0144497438615 |
Amino acid sequence | MFSISRSSSKSSAKWEIKMSQMWWFQNVLLLYMLCSS |
Secondary structure | LEEEELLLLLLHHHHHHHHHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |