NONHSAT043873

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT043873

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1954 nt

Genomic location

chr15-:51859240..51914967

Exon number

3

Exons

51859240..51860755,51868253..51868378,51914656..51914967

Genome context

Sequence
000001 TTTCCGCAGC TGAGCGGCGA CCCGGGCGGC GGCGGCGGTC GAGGAGCTCC CATGGCAGGG ACGAGGCGGA GGGAAGGCGA 000080
000081 AAGGGGGGCG AGGAGTTAAG CCAGAGCCTC CGCGGGGCGG GTTTCCGAGG GAGGCACAGA GGGAAACGGC TCTCGCAGCC 000160
000161 CGAGGAGGGT CAGGCGCGGA GCTTGTCGCA CCTCCCGCGC ATTCTGTCCA GCCCGGGCTC CGGAGATGCA TCTGCATCAG 000240
000241 GTCCTCACCG GAGCTGTCAA CCCTGGAGAC AACTGCTACT CCGTGGGCAG CGTCGGGGAT GTCCCCTTCA CGGCATATGG 000320
000321 ATCAGGCTGT GATATTGTTA TTTTGGCAAA TGACTTTGAA TGTGTACAGA TCATTCCTGG TGCTAAGCAT GGAAACATCC 000400
000401 AAGTCAGCTG TGTGGAGTGT TCTAACCAAC AAGGAAGAAT TGCAGCTTCA TATGGTAATG CTGTTTGTAT ATTTGAGCCC 000480
000481 TTGGGCATAA ATTCTCATAA AAGAAATTGT GTAAGTATTA ACCAATAATA GAATACTTTT AGAATCTAGT TAACTTTAGA 000560
000561 ATCCAATTGA TGTTAATAAA AAGCTCCTTA GGAGCTAGTG CTGAAAATAG ACTAGAGTAT CAGTGAAAAA TTGGTCTAGT 000640
000641 GCTTTATGTT AGGATCCTTA CATTCACTAC GGATACATCC CTAGTGCTTT TAGAAACCCA AGTCTCTAGA ATATTGCAAA 000720
000721 TTGACATTTA CTGTGTTAAC TGAGATctac cctagtttga actactgtta tttcttgtct ggattactaa tatctatctg 000800
000801 atatctggtt tcctgctgcc ttcagcccca gtgtctgttc tcaacagagg agatcatgac atttctctgc ttaaaacttt 000880
000881 gtaatggttc catatttctc tctctttttt cttttgtttt gagacagggt cgcactgtat cccctgggct ggagtgcagt 000960
000961 ggcatgatca ctgctcactg cagcctcaac ctgtcaaatg gtcctcccac ctcaacctcc caagtagttg cgactatagg 001040
001041 catgtaccac catggccagc taatttttaa atttttcgta gagatggagt ttccctgtgt tgctcaggct ggtcttgaac 001120
001121 tctggggcta agtgatcctc ccacttcagc ctcccaaatt gctggaatta tgggcatgag ccaccatgcc cagctgctcc 001200
001201 atatttcttt cagataaaaa gccaaaagcc ttttgtagac tacaacttcc cttctactca gtagcacagt tactatgtct 001280
001281 cagagctcac ctcgtaagtt cttgtcctct ctggttctac tctggccaca ttggcatttt tactgtttct cagttaacct 001360
001361 tccctctttg agcctttgtg ttgtttgttt tctttgtcag gaatgttttt cctccagcta tctccaagga tagctcccat 001440
001441 agatccttta ggtctttgct cactaatacc ttgtcaatga ggtttacctt gaccaccctt taaaaaattg tacccccact 001520
001521 tatcttgcta tttaaaaatt tttttacagc atttatttat ttattgttta ctatgtaaaa tgttatctaa aggtacataa 001600
001601 gggtaggaag cttttttcac tgatgagtcc ccagtactta gaacagtatc tggaacagcc aggtgtggtg gctcacacct 001680
001681 gtaatcccaa cactttggga ggctgaggcg ggtggaacac gaggtcaggg gtttgagatc agcctggcca acatggtgaa 001760
001761 accccgtgtc tactaaaaat aaaaaaatta tccaggtgtg gtggcacgtg cctatagtcc ctgctgctag gaaggctgag 001840
001841 gcaggagaat cgcttgaacc caggaggtgg aggttgcagt gatcctggac tgcaccattg cactccagct tgggagtcag 001920
001921 agcaagactc catctcaaaa aaaaaaaaaa aaaa
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Predicted Small Protein

Name NONHSAT043873_smProtein_1274:1432
Length 53
Molecular weight 6006.9914
Aromaticity 0.173076923077
Instability index 87.9867307692
Isoelectric point 7.64825439453
Runs 8
Runs residual 0.00347674923946
Runs probability 0.118530295001
Amino acid sequence MSQSSPRKFLSSLVLLWPHWHFYCFSVNLPSLSLCVVCFLCQECFSSSYLQG
Secondary structure LLLLLHHHHHHHHHHHLLLLEEEEEEELLLLLLEEEEEEEHHHHHLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTooooooooooooo