NONHSAT043889
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT043889 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
413 nt |
Genomic location |
chr15+:52213706..52239491 |
Exon number |
2 |
Exons |
52213706..52213813,52239187..52239491 |
Genome context |
|
Sequence |
000001 cctagagtgc ctaacctggc ctgtgtgctt gtaagcttct gctcattctt caatacccag cagagacttc ctcctccatg 000080
000081 cagccttcca agacccacct gagtacagGC CTTTCCATCT ATCCGGAGTG ACCTACCAGA GACAGGACAG TTTGACCAGC 000160 000161 AAGCTTCTGA TCACTCTTCA ACACCCAGCA AGAAGTCTTA TCCTCCATGC AGCCTTCTAA GACCTCTCTA AGCACAGGTA 000240 000241 TCAGATCCTC CTCTGGATCA CTCTGTCTTG TTACTGCATT TATCTCACTG GATTTCAGTG ACGTGTGTAG ACAACTAATT 000320 000321 TGTGCCTGCC TGATCTGTGA GCTCTTCATT CAAAGCAGTT GGCTCCTGAG TACAGGATAA ACCCCTAGAA TTGAATAAAT 000400 000401 TTGGTCTTAC CTC |
Predicted Small Protein
Name | NONHSAT043889_smProtein_206:379 |
Length | 58 |
Molecular weight | 6119.1137 |
Aromaticity | 0.0701754385965 |
Instability index | 53.5438596491 |
Isoelectric point | 5.86505126953 |
Runs | 7 |
Runs residual | 0.0311403508772 |
Runs probability | 0.0440482499306 |
Amino acid sequence | MQPSKTSLSTGIRSSSGSLCLVTAFISLDFSDVCRQLICACLICELFIQSSWLLSTG |
Secondary structure | LLLLLLLLLLLEEELLLLEEEEEEEEELLHHHHHHHHHHHHHHHHHHHHHHHHHLLL |
PRMN | LLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHLLLLLL |
PiMo | iiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTTTTTTiiiiii |