NONHSAT043990
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT043990 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
579 nt |
Genomic location |
chr15+:55611430..55612228 |
Exon number |
2 |
Exons |
55611430..55611611,55611832..55612228 |
Genome context |
|
Sequence |
000001 AGGAAGGTGG CGGCCAGGGA TGAGGAGGCC CCTAAGCAAG TGCGGAATGG AGCCGGGGGG CGGAGATGCC AGCCTCACTT 000080
000081 TGCATGGTCT CCAGAACCGC TCCCACGGCA AGATAAAGCT GCGAAAGAGA AAGTCTACCT TGTACTTCAA CACCCAGGAG 000160 000161 AAGAGCGCCA GGCGCCGCGg ggGCTGTCCA TTTGTGGTCa agagcaggac tttggagaca tcacacagac ccgggtttga 000240 000241 atcctgataa gtaatttaca actttatttg gacaaggcag tttaatttct gggcctcaat ttgctcgtct gtaaaatggg 000320 000321 gctaataata cctatcccat aatattgttt ggaggattaa gtgagatgca tgtgaagaaa ttaacacagt gcctggcata 000400 000401 tataatagta atcatcaata tatATGTACA GAGGACCATT TTATATTGCA CATATACAAA GGGCTGCTTC CCAAATTAGT 000480 000481 AATTTGTTAG CTGGTTTCTT TCATTAGATA CACACATAGT ATGACCTAAT TAATTAGCCT AAGGCCTTAG TTAACCCACT 000560 000561 Cttttttttt tgtatttat |
Predicted Small Protein
Name | NONHSAT043990_smProtein_365:478 |
Length | 38 |
Molecular weight | 4366.2835 |
Aromaticity | 0.135135135135 |
Instability index | 47.4810810811 |
Isoelectric point | 9.25738525391 |
Runs | 6 |
Runs residual | 0.017604760724 |
Runs probability | 0.107342636754 |
Amino acid sequence | MHVKKLTQCLAYIIVIINIYVQRTILYCTYTKGCFPN |
Secondary structure | LLHHHHHHHHHHHEEEEEEELLLEEEEEEELLLLLLL |
PRMN | LLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL |
PiMo | iiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooo |