NONHSAT043990

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT043990

Source

NONCODE4.0

Same with

,

Classification

sense

Length

579 nt

Genomic location

chr15+:55611430..55612228

Exon number

2

Exons

55611430..55611611,55611832..55612228

Genome context

Sequence
000001 AGGAAGGTGG CGGCCAGGGA TGAGGAGGCC CCTAAGCAAG TGCGGAATGG AGCCGGGGGG CGGAGATGCC AGCCTCACTT 000080
000081 TGCATGGTCT CCAGAACCGC TCCCACGGCA AGATAAAGCT GCGAAAGAGA AAGTCTACCT TGTACTTCAA CACCCAGGAG 000160
000161 AAGAGCGCCA GGCGCCGCGg ggGCTGTCCA TTTGTGGTCa agagcaggac tttggagaca tcacacagac ccgggtttga 000240
000241 atcctgataa gtaatttaca actttatttg gacaaggcag tttaatttct gggcctcaat ttgctcgtct gtaaaatggg 000320
000321 gctaataata cctatcccat aatattgttt ggaggattaa gtgagatgca tgtgaagaaa ttaacacagt gcctggcata 000400
000401 tataatagta atcatcaata tatATGTACA GAGGACCATT TTATATTGCA CATATACAAA GGGCTGCTTC CCAAATTAGT 000480
000481 AATTTGTTAG CTGGTTTCTT TCATTAGATA CACACATAGT ATGACCTAAT TAATTAGCCT AAGGCCTTAG TTAACCCACT 000560
000561 Cttttttttt tgtatttat
[back to top]

Predicted Small Protein

Name NONHSAT043990_smProtein_365:478
Length 38
Molecular weight 4366.2835
Aromaticity 0.135135135135
Instability index 47.4810810811
Isoelectric point 9.25738525391
Runs 6
Runs residual 0.017604760724
Runs probability 0.107342636754
Amino acid sequence MHVKKLTQCLAYIIVIINIYVQRTILYCTYTKGCFPN
Secondary structure LLHHHHHHHHHHHEEEEEEELLLEEEEEEELLLLLLL
PRMN LLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL
PiMo iiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooo