NONHSAT044073
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT044073 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
909 nt |
Genomic location |
chr15+:57669344..57699474 |
Exon number |
8 |
Exons |
57669344..57669363,57686151..57686289,57689122..57689304,57690539..57690628,57694217..57694236,57694859..57694912,57698164..57698262,57699171..57699474 |
Genome context |
|
Sequence |
000001 ACTGTTTGGC CTCTAGACAG CCAAAGCCTT TTGTCACCCA GGCTGGAGTG CCATGGCACG ATCATGGTTC ACTGCAGCCT 000080
000081 CAGCCTCCTA GGCTCAAGCC ATCCTCCCAT CTCAACCTCC CGAGTAGCTA GGACCACAGG CACGCACCAC CAAACCAGGG 000160 000161 AGTTTATAGT CCAGTGGAAG AGAAAGACTC AGAAATCACA TAATCATAGT CCAACACAGA ATCCATGCAT AGGGCACTGT 000240 000241 TGGAGCACTG GGAGAGTCTA CTTCAATCTG TGGGTTCAGG ACGGGGTCGC TAAAGTCTTG CAGAAAGAAG TCAGTCTTCT 000320 000321 GGGATATGGC TTCTTCGGGA AGATACTGTT AATGGGGATT TTGGATGGCC ATATAATGAA ATAGGAAAAC GATTAATGGA 000400 000401 AGCCCAGGAG GAAAGACTTG GTGTTATTAT AGCAGCCATC TTGGATTGTG AGTGTGTCTC CAACACCATC TTGAAGGTGC 000480 000481 AGTGACTTGC ATATAGTAGG TGCTTGATAT TTACCAAGTA CCCCCTGTGG GTCAGGCCCT ACTCTCACCC TAAGGATACA 000560 000561 GCAGGAAGCA AAGCAGAGGT GGAGAAGATC CCACTAAACA CACAGGCCGC TTGGAATGTT GGGCCATCTG TCCTTTTGAC 000640 000641 ATGAATTTTC CCTGTAATGG GGGTAGAGCT GGTAACTGTT GGATCATCTG ATTATTGGAG ACAGAAGTCC TGTCACTTGC 000720 000721 CCCTGCTGTT AGGAGGTGGG CTTCCTGAAT GGCTTTCTGT ATACATGAAG AATTTCAAGA CCTTCCGTTA AGGTGGTCAG 000800 000801 AGCTAAGTTT CAGCGTTTAC AAGAGGTCTC TTGGCTGACT TGCTATAACT TACAGCAACC TGATGTTTGG ACACCTTTTC 000880 000881 CTTTTTTTGT TTTTAGTAAA TATGATGAG |
Predicted Small Protein
Name | NONHSAT044073_smProtein_656:790 |
Length | 45 |
Molecular weight | 5044.8699 |
Aromaticity | 0.136363636364 |
Instability index | 49.0772727273 |
Isoelectric point | 9.03424072266 |
Runs | 9 |
Runs residual | 0.0414438502674 |
Runs probability | 0.048528921078 |
Amino acid sequence | MGVELVTVGSSDYWRQKSCHLPLLLGGGLPEWLSVYMKNFKTFR |
Secondary structure | LLEEEEEELLLLHHHHLLLLLLEELLLLLHHHHHHHHHHLLLLL |
PRMN | - |
PiMo | - |