NONHSAT044112

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT044112

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

1773 nt

Genomic location

chr15+:58813510..58815570

Exon number

2

Exons

58813510..58813845,58814150..58815570

Genome context

Sequence
000001 GACACGTACA GCTTAGAGCC TAGTCATGAA ATGGGAAATA AACAGCCCCA TCCTCAAGGT CTGAACAGGG GATTGGGGAG 000080
000081 CACAGAGAAG GGCCCCACCC CGACCAGCTG TCAAGAGAAC TATCCATACA TTCTAATTCC TCCAAGGTTG AGGGCTAAGG 000160
000161 TGTAGGAAGA GGAGAGAGGT TCCAAGCAGA AGGAATTGCA GAAGCAAAGG CACAGAGGCA TCCGGGACCT GCGAGCAGCT 000240
000241 ATGGCTGGAG CCGCGTGTCG CAGGATGGAG AGCGTGTGAA CAGAGGGGAC TGGAAGCGGA TCCTCCCAGG AAGCAGTTGC 000320
000321 AGGCGGTCAT GCTACATTTG CAGGGAGACG GGAGGTTGTG AAGAACAATA ACCAGAAGAG AGTTTGCGTC TTCATCAGAA 000400
000401 AGCACCTGGG GCAGGTAGAG TTGGTGCTAG CTTCTCCATC CATCCCTGAC ACCCCAGCCC CATTCATCAT TCAGCAGAAG 000480
000481 ACAGGCTGGG CTGGCCCAAC TTGGTCCTGT ACCCCCACCA CCCCAGAACC CCACTGGTCC ATAGTGAGGA TCCCTTCTCT 000560
000561 TTGACTCTCC TCCTTCTCTG TGACTCGCCT AAGCCTGATC CTACACCTTC TCTCCCAGCC ACTGCCTCAG CTTCCTCCAC 000640
000641 CCCCAGCTTG GGACGAGCCA CCTCCCTGGC TGGGTAGCAT GGGACAAGCC ATCTCCCTGC AGAGGCAGAG AACCAGTGAC 000720
000721 ACTACACGCA AACCAAGGCC ATGCTGCAAA CAGAACACCA AGGCACCCTC GTCTTAGGAT GCATTATATT CGGGGTAGAT 000800
000801 GTTGAATTCT AGTAACACAT TCCCTGGGGT GTTTTCAAAT CCAGACACAC TGGAGCCTTG TTCCAGCCTC ACTGTGGGCG 000880
000881 AAGGCCCCGG GCTCACCTCC AGCCTCAGGC TGGCTCTGGC TGCTGCCCCT GTTCCATCCT GGCAAGCGGA ACTGAACAGG 000960
000961 CCCGACTCCA CAGCCCCCGG TGCTGCCAGC TGCAAGCTCT GCTGACTCCA ACCTCAGGCC CCTGCGTGCC TGCTTCTAAA 001040
001041 TCCACACGTT CCTGCTCCTT CCTGCCCCTG CTGCCCTCTC AGAATGCCAC TTCTTTCTGC CAAGACCTCA GGCATTGCTA 001120
001121 TGGCCCAGCC CCATCTTTAT TGATGTCGGG GCTCTGTCCC CTTGCAGAGC CCATCCCATT GCCACCCACA TCTGGGACAG 001200
001201 CAAAACACTT CTCAGTTTCC TCCAGAGTTC AGTTTCTTCC AAAAAGCTTG GCACATCTTA GCTGCCAGTG TGAACTGTGA 001280
001281 GCTCCCAGAG ATGCCCGTGG CACTTTCCAA CATTCGTCAC TTTTGACACA TCTAAAATAT CCTAGCTCCC AGAGCTGCGT 001360
001361 GAGCACCAGC CCAGATGGAC CGGCTGCTGG GGAAGCATCA GTCTCTCCAG GGCCTCTGTG AAGCCCTGGG GCAGTAGGGG 001440
001441 GATGTCTGAC AAAGCTTCCT AACTGAGGAG CCCCACTTCC TCTCGCTCTG GGCACCCCTG CCAAATGAGC GGGCACCTCT 001520
001521 ATGTTCCAGC AGCCCTCGCT GCCCAGCTTC TGAGCTGCAA GCCAGCTTCC TTCCACAGAA TTCTCTGCAC CTTGGCTTCC 001600
001601 GGTGGCTCCA AGCACTTTGC CATCTGCCGA GTCAGTTCTG CCAGAGATGA AGCAGCTGAT GTGGGGAGTT CTCTGTGGGG 001680
001681 GCCACCTTTC CTCTCTCAGG TCACCTTTAC TCTCAGAAGG AAACTGACCC CCTGACCTAT TAAACAGCTG AAATCAAAAA 001760
001761 AAAAAAAAAA AAA
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Predicted Small Protein

Name NONHSAT044112_smProtein_1142:1279
Length 46
Molecular weight 4779.5821
Aromaticity 0.0444444444444
Instability index 45.0022222222
Isoelectric point 7.76934814453
Runs 9
Runs residual 0.0377525252525
Runs probability 0.0167913011051
Amino acid sequence MSGLCPLAEPIPLPPTSGTAKHFSVSSRVQFLPKSLAHLSCQCEL
Secondary structure LLLLLLLLLLLLLLLLLLLLLEEEELLLEEELHHHHHLLLEEEEL
PRMN -
PiMo -