NONHSAT044112
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT044112 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1773 nt |
Genomic location |
chr15+:58813510..58815570 |
Exon number |
2 |
Exons |
58813510..58813845,58814150..58815570 |
Genome context |
|
Sequence |
000001 GACACGTACA GCTTAGAGCC TAGTCATGAA ATGGGAAATA AACAGCCCCA TCCTCAAGGT CTGAACAGGG GATTGGGGAG 000080
000081 CACAGAGAAG GGCCCCACCC CGACCAGCTG TCAAGAGAAC TATCCATACA TTCTAATTCC TCCAAGGTTG AGGGCTAAGG 000160 000161 TGTAGGAAGA GGAGAGAGGT TCCAAGCAGA AGGAATTGCA GAAGCAAAGG CACAGAGGCA TCCGGGACCT GCGAGCAGCT 000240 000241 ATGGCTGGAG CCGCGTGTCG CAGGATGGAG AGCGTGTGAA CAGAGGGGAC TGGAAGCGGA TCCTCCCAGG AAGCAGTTGC 000320 000321 AGGCGGTCAT GCTACATTTG CAGGGAGACG GGAGGTTGTG AAGAACAATA ACCAGAAGAG AGTTTGCGTC TTCATCAGAA 000400 000401 AGCACCTGGG GCAGGTAGAG TTGGTGCTAG CTTCTCCATC CATCCCTGAC ACCCCAGCCC CATTCATCAT TCAGCAGAAG 000480 000481 ACAGGCTGGG CTGGCCCAAC TTGGTCCTGT ACCCCCACCA CCCCAGAACC CCACTGGTCC ATAGTGAGGA TCCCTTCTCT 000560 000561 TTGACTCTCC TCCTTCTCTG TGACTCGCCT AAGCCTGATC CTACACCTTC TCTCCCAGCC ACTGCCTCAG CTTCCTCCAC 000640 000641 CCCCAGCTTG GGACGAGCCA CCTCCCTGGC TGGGTAGCAT GGGACAAGCC ATCTCCCTGC AGAGGCAGAG AACCAGTGAC 000720 000721 ACTACACGCA AACCAAGGCC ATGCTGCAAA CAGAACACCA AGGCACCCTC GTCTTAGGAT GCATTATATT CGGGGTAGAT 000800 000801 GTTGAATTCT AGTAACACAT TCCCTGGGGT GTTTTCAAAT CCAGACACAC TGGAGCCTTG TTCCAGCCTC ACTGTGGGCG 000880 000881 AAGGCCCCGG GCTCACCTCC AGCCTCAGGC TGGCTCTGGC TGCTGCCCCT GTTCCATCCT GGCAAGCGGA ACTGAACAGG 000960 000961 CCCGACTCCA CAGCCCCCGG TGCTGCCAGC TGCAAGCTCT GCTGACTCCA ACCTCAGGCC CCTGCGTGCC TGCTTCTAAA 001040 001041 TCCACACGTT CCTGCTCCTT CCTGCCCCTG CTGCCCTCTC AGAATGCCAC TTCTTTCTGC CAAGACCTCA GGCATTGCTA 001120 001121 TGGCCCAGCC CCATCTTTAT TGATGTCGGG GCTCTGTCCC CTTGCAGAGC CCATCCCATT GCCACCCACA TCTGGGACAG 001200 001201 CAAAACACTT CTCAGTTTCC TCCAGAGTTC AGTTTCTTCC AAAAAGCTTG GCACATCTTA GCTGCCAGTG TGAACTGTGA 001280 001281 GCTCCCAGAG ATGCCCGTGG CACTTTCCAA CATTCGTCAC TTTTGACACA TCTAAAATAT CCTAGCTCCC AGAGCTGCGT 001360 001361 GAGCACCAGC CCAGATGGAC CGGCTGCTGG GGAAGCATCA GTCTCTCCAG GGCCTCTGTG AAGCCCTGGG GCAGTAGGGG 001440 001441 GATGTCTGAC AAAGCTTCCT AACTGAGGAG CCCCACTTCC TCTCGCTCTG GGCACCCCTG CCAAATGAGC GGGCACCTCT 001520 001521 ATGTTCCAGC AGCCCTCGCT GCCCAGCTTC TGAGCTGCAA GCCAGCTTCC TTCCACAGAA TTCTCTGCAC CTTGGCTTCC 001600 001601 GGTGGCTCCA AGCACTTTGC CATCTGCCGA GTCAGTTCTG CCAGAGATGA AGCAGCTGAT GTGGGGAGTT CTCTGTGGGG 001680 001681 GCCACCTTTC CTCTCTCAGG TCACCTTTAC TCTCAGAAGG AAACTGACCC CCTGACCTAT TAAACAGCTG AAATCAAAAA 001760 001761 AAAAAAAAAA AAA |
Predicted Small Protein
Name | NONHSAT044112_smProtein_1142:1279 |
Length | 46 |
Molecular weight | 4779.5821 |
Aromaticity | 0.0444444444444 |
Instability index | 45.0022222222 |
Isoelectric point | 7.76934814453 |
Runs | 9 |
Runs residual | 0.0377525252525 |
Runs probability | 0.0167913011051 |
Amino acid sequence | MSGLCPLAEPIPLPPTSGTAKHFSVSSRVQFLPKSLAHLSCQCEL |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLEEEELLLEEELHHHHHLLLEEEEL |
PRMN | - |
PiMo | - |