NONHSAT044128

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT044128

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1425 nt

Genomic location

chr15-:59060271..59063173

Exon number

2

Exons

59060271..59061078,59062586..59063173

Genome context

Sequence
000001 TTCTTTAAAG GGAAGGCAGG AGGCGGACAG CTTGGCTGTG ACCCTTTAGC GCTGGGTCGC GTGTGGCCCA CCCTCGGCCT 000080
000081 GAGGCATTGT TGGGTGGTTG GAGGTGGTTG TAGTATTTGG AAAAGAACTT GTCCCTGAAG GGCTCAGGGG ACTTGGTTTC 000160
000161 TCAGCTCCTA ATATGGAAAA TTAAGGCATT TCTTACGAGA TGCAGATTTT AAAGCAGGCA TATCTACTCG ACGGCTTTGG 000240
000241 ATTACTGCAC TGCACAAATT CCAGTCTCTG TCGGTTTTGG CTGAGAAGAG CTGTGCTTCT CACCAGCTAC TGGTGAGACA 000320
000321 TTCGCCCTAC AGGAAAGGGT CGGTATGATT GTGGACATTG ACATGCGTAG CAAAAGAAAG TGGCTAATTT GCGCCAATAA 000400
000401 TAATAAATTA GCTTGTATTT GAATTAGCCA AGTCTTTGCG GTTTTGCTAA CTTGGCTTCA CTTTGCATGG AGTGGGAAGC 000480
000481 GCCTGCTTCT GAAAAGGTGA CTTTTTTCCT AATTAGAATG GACTCCTCTT AAGGCCATGC AGTTTTCAAA GAAGAAAGAC 000560
000561 AAGCTGGACG TTTTGTTAGT AACAAAATGT AGCTGAAGCA GAGAGAGAAG GCAGCATACG TCAGCATTTT CTTCTCTGCA 000640
000641 CTTACAAGAA AGATCAAAGA CTTTAAGACT TTCACTGTTT CTTCTACCGC TATCTACTAC GAGCTTCAAA GAGGAACCAG 000720
000721 GAGTATGGGA GGAGCATGAA AGTGGACAAG GAACGTGACC ATTGAAGCAC AGCACCACAG GGAGGGATTT AGGCCCCAGG 000800
000801 ACTGCAGGCA GGCCTGGATA ATATCCAGCC TTCCACAAGA AGCTGGTGGA GCAGTGTTCC CTGACTCCTC CAAGGAAAGG 000880
000881 AGACTCCCTT TCACGGTCTG CTAAGTAACG GGTGCCTTCC CAGACACTGG CGTTACCGCT TGACCAAGGA GCCCTCAAGC 000960
000961 GGCCCTTACG CGGGCGTGAC CGAAGGCTCA CCTCTTGTCT TCTAGGTCAC TTCTCACAAT GTCCCTTCAG CACCTGACCC 001040
001041 TATACCCGCT GGTTATTCCT AGGTTATATT AGTAATGCAA CAAAGAGTAA TATTAAAAGC TAATGATTAA TCATGTTTAT 001120
001121 AATAATGATT GATAATTGTC CATGATCATC TCTATATCTA ATTTGTATTA TGACTATTCT TATTCTAACT ATTTTCTTTA 001200
001201 TTATACTGAA ACAGTTTGTG CCTTCAGTCT CTTGCCTCGG CACCTAGGTA ATCCTCCACC CACATCCTAC TCTTGGACAA 001280
001281 CAGGAAAATT AGAAAAGATA ATGGAGAGCT TTTTCAGAAT GTTGAATTTA GGAGTTGTGT GTGCTTTTGA TCTCCATGTC 001360
001361 AATCCATAAA CAATAAATCC TGTTCTTAAA TTTGAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAA
[back to top]

Predicted Small Protein

Name NONHSAT044128_smProtein_344:421
Length 26
Molecular weight 2949.5836
Aromaticity 0.04
Instability index 56.38
Isoelectric point 9.38360595703
Runs 5
Runs residual 0.00830188679245
Runs probability 0.0284755343579
Amino acid sequence MIVDIDMRSKRKWLICANNNKLACI
Secondary structure LEEEELLHHHHHHHHHHLLLLLLLL
PRMN -
PiMo -