NONHSAT044213
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT044213 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
561 nt |
Genomic location |
chr15-:60758872..60771311 |
Exon number |
6 |
Exons |
60758872..60758912,60760260..60760361,60768262..60768366,60770136..60770268,60770767..60770836,60771202..60771311 |
Genome context |
|
Sequence |
000001 ACATCCTTTA AATATGGTCT TTTTTGGGCG CGCGCGACAA TGTGAGGAGT GGGGTGGAGC GTGTGTGGTG TGTGGCTGCG 000080
000081 GCCTGGGCAA GAGCCGCCGC GGACCATGAG TCTGCCTGGG GTCACAGGAG AAGTACTGAA CATGAGAGAT CAAGCCTGAT 000160 000161 TTGTAGTCCT GATGATGTCT CTGAGTAAGT TCTGGAGGGA TCCTGCCTCT TGGAGCCTTC GCAGCCAGGC AGCTGTGAAC 000240 000241 TGTGAGCTAG AGTGAAGCAG AAATCTAGGA AGATGAGCTC CAAGATGGTC ATAAGTGAAC CAGGACTGAA TTGGGATATT 000320 000321 TCCCCCAAAA ATGGCCTTAA GACATTTTTC TCTCGAGAAA ATTATAAAGA TCATTCCATG GCTCCAAGTT TAAAAGAACT 000400 000401 ACGTGTTTTA TCCAACAGAG AGAGCAGAGG AGTTATGTGG ACTTGTTGGT TAAATACGCA AAGATTCCTG CAAATTCCAA 000480 000481 AGCTGTTGGA ATAAATAAAA ATGACTACTT GCAGTACTTG GATATGAAAA AACATGTGAA CGAAGAAGTT ACTGAGTTCC 000560 000561 T |
Predicted Small Protein
Name | NONHSAT044213_smProtein_272:493 |
Length | 74 |
Molecular weight | 8571.8685 |
Aromaticity | 0.0958904109589 |
Instability index | 50.1123287671 |
Isoelectric point | 9.65045166016 |
Runs | 13 |
Runs residual | 0.0339372514361 |
Runs probability | 0.0431087195793 |
Amino acid sequence | MSSKMVISEPGLNWDISPKNGLKTFFSRENYKDHSMAPSLKELRVLSNRESRGVMWTCWL NTQRFLQIPKLLE |
Secondary structure | LLLEEEEELLLLLLLLLLLLLLEEEELLLLLLLLLLLLLLHHHHLLLLLLLLLEEEEEEL LHHHHHLHHHHLL |
PRMN | - |
PiMo | - |