NONHSAT046585
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT046585 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1238 nt |
Genomic location |
chr15+:63188011..63191742 |
Exon number |
2 |
Exons |
63188011..63188342,63190850..63191742 |
Genome context |
|
Sequence |
000001 CTGTGTGGTG CTGGGTGTGA GTCGGAGCTA GCCTGGGTTT ACCTGAGTTG CAGGGTCACC CCTCATCGCA CCCTTGTCAG 000080
000081 TCCTCAAATA GGGGTGCAAC TGTTCCATGA AAGGGAACAA AGAGACTGAG CTACTAGACA CCAAGCTGTT TAGGACTGAA 000160 000161 CCCATTCCTG TCCAAACAGA AGTGATCCAG AGGGACTCTG AATATTACAG AAGTCAAGAG ATTTCATCAT CTTTATTCAA 000240 000241 AGAAAGGGGT TTGTTTGTTG ATTTTTTGGA TTTTTTTTTT GGACTACAGC TCTATCTACT CCCTGAAGAG TAAGGATTAT 000320 000321 TAAGTAAATC AGATGGAAAA AGAATCGCAA ATAAGCATAA TGTGAAGAGC ATGAGCTTTG GAATAAGCAA GCCTGGAATT 000400 000401 ACAATTTTCT TTTATTAGCT CTGTGGCTGT AACACTCAAC TTTTGCAAGC TTCAGTTTCC TCGTCTGTGA AATGGAATAA 000480 000481 TAGCACTTAC CTCATTGGCT GTTGTATGGA TTAAATGAGA CCATGACTAT GGATGTATGG CATTTGGTAC CCAATAACCC 000560 000561 CTCAGTAATC GGCAGCTATA ATTATTCATA ATAATAATGG TGGTAGCAAC AAACCCAGCC CAAACATCTG AAGGACCGAT 000640 000641 CACTAAAAAG AAGATGAACT CAGTCCTACG TAGTAACAAG AATGTGACAT CTATGTTGTT GCCAAAAGTC TGGAGGAGTT 000720 000721 GCCAGGACCA GAGAGAAGGA GGTGGTGAGG CCGGCCTGGA AGAGGGAGGG GACAGATGTC AAGGACCCCA ATCTTGAGGT 000800 000801 GGAAAGTTCT GTGATTAACC CAGATGAATG TCTCTAACCT CCAACTCTTC TGTTCTCAGA GTTTTAATGG GGCACACCGT 000880 000881 GTGCTGGGCA TTGACATAGA TGGGAAAAGC ATGACCTAAA ATAAGGGCTG GAAGCCAAGA CTGGGAGGAA GGGCAAAGGG 000960 000961 AGCAGGCAGC CTGGCACCAG GTACCAGTGA GGTGTCTGCT CTTTGTCCCC ATCACCTGTC AGCTAAGGAA TTCTGCATGT 001040 001041 CATCAGTGCA ATAAAATGTG ATCGCCAGAG TGAAAACCTT GTAACAGACC AGCTGTGGCT TCTCTCAACA CCAGTATGTC 001120 001121 CAAGGAGGAT GCATTTTTAT TGCTTTTGTG GTCTTAACAA AAAAGATTCA TGAGCATTGT ATAAAAGGCA TTTTAAAACA 001200 001201 ATTCGGTAAA AGGATGAAAG AAAAAAAAAA AAAAAAAA |
Predicted Small Protein
Name | NONHSAT046585_smProtein_596:796 |
Length | 67 |
Molecular weight | 7088.9318 |
Aromaticity | 0.0151515151515 |
Instability index | 61.4893939394 |
Isoelectric point | 8.76727294922 |
Runs | 12 |
Runs residual | 0.0312103066594 |
Runs probability | 0.0334893717247 |
Amino acid sequence | MVVATNPAQTSEGPITKKKMNSVLRSNKNVTSMLLPKVWRSCQDQREGGGEAGLEEGGDR CQGPQS |
Secondary structure | LEEEELLLLLLLLLEELLHHHHEEELLLLEEEEELLHHHHHHHHLLLLLLLLLLLLLLLL LLLLLL |
PRMN | - |
PiMo | - |