NONHSAT046670
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT046670 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
3422 nt |
Genomic location |
chr15-:64762013..64784651 |
Exon number |
15 |
Exons |
64762013..64762781,64763458..64763785,64766995..64767176,64767479..64767575,64767981..64768500,64771285..64771373,64772503..64772811,64773978..64773983,64774267..64774635,64776998..64777233,64782015..64782049,64782058..64782114,64782707..64782857,64782918..64782969,64784426..64784651 |
Genome context |
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Sequence |
000001 TTCACAGGCA TCTAAAGTAT TAGAAAAATA AGGAAAAGTT TAAAAAATTT TTTTTTACAA ATTAAATTAC AGGTTGTACC 000080
000081 AATACCCATT TGAGTTCTAT GAAAGGAAAT GGCAATCTTT TCTTCTTCCA TGAACTCAGT GATTAGGGTT TTCCTTTTAG 000160 000161 GCTATGCCTA CCTTCACATG TGGCTTTTTT TCTTCTTCTT TTCTTTGAGA CAGAGTCTCA CTGCTCTGTG CCAGCATGTA 000240 000241 TCTCACAATA GGCTAAATGG TATCCTGAAT ATGTCCTTAC TAAATCCTGT GTATAGCTAG GCCAAAAAGC AGAGGCAGAT 000320 000321 TATCTGAGGT AAACAATTAA AAAAAAACTA CTAGCTGGGG GCTGGGCACG GTGGCTCATG CCTGTAATCC CAGCACTTTG 000400 000401 GGAGGCCAAG GTGGATGGAT CACCTGGCTA TGTAGCTCTT TAGAAGTTCT TATCCCCAGA GATAAACTTT TTGTGCTAAG 000480 000481 GATGTCAAAT TGTTAGAAAA AAAGTGGCTG GGCATGGACA CTAAGTTAAT TTTGCGAGGA ATATCTTACC AAGATTCCTA 000560 000561 GTTTCTTTCA CTTTTTTTTT GAGACGGAGT CTCGCTGTCG CCCAAGCTGG AGTGCAGTGG CGCAATCTCG GCTCACTGCA 000640 000641 ACCTCCGCCT CCCGGGTTCA AGCGGTTCTC CTGCCTCAGC CTCCTGAATA GCTGGGACTA CAGGCAAGCG CCACCATGCC 000720 000721 CAGCTAATTT TTGTATTTTT AGTAGAGATG GGGTTGAGCT CATCAAGTTT ACTGATTTAA TCAAGAAAAG CCTAGGCAGC 000800 000801 CAGAAAAAAA AAACGTATAG GAAATATTAA ATAAATGTTA ACATTTCTGG GATAATTCCT GGGACTTCTA GATATTTTTC 000880 000881 TGTACTTTCT AGAGGATTTA TTCACGTTCC AATCAGAAAA AAACTTTTAA AAAAAGTTAA GCATCTATCA TCATTTGTAC 000960 000961 TAGAAACTTT AATCTGGTTG GAAAGAAATA GTGGAAATTC TCTAATGTTT TCATTCTTAA ATGGATCTTT CACACCATGA 001040 001041 TTAAGTAGTC TTACCAATTC TCTAGCTGAC CTTTTCATTA TAACATATCT TTTTTAAAAA CAAAAACAAG GCTGGGCACG 001120 001121 GTAAAAAAAC CTGAACAGTT AGTCTCCTTC CATCAAGCAT ATGAGATGAG AATTAAATTA TTGGTAACAC TTTTTTTGTT 001200 001201 TTTTTTTTTG AGATGGAGTC TCACTCTTGT TGTGCAGGCT GGAGTGCAGT GGTGGAATCT CGGCTCACTG CAACTTCCGC 001280 001281 CTCCTGGGTT CAACCTATTC TCCCGCCTTA GCCTCCCAAG TAGCTGAGAT TACAGGCACC CGCCACTACG CCCAGCTAAT 001360 001361 TTTTGTATTT TAGTAGACGG GGTTTCACCA TGTTGGTCAG GCTGGTCTCG AACTCCTGAC CTCAGGTGAT CCACCTGGGC 001440 001441 TCCATAAGAA AAATAATATT GCCAGATACT TCCTTGAACT TCCCACTGTG TCAGATAGTG TTACGAAACT CATCTGAAAT 001520 001521 CCACATTTTT TTTTTTTGGT CTATTTTGTT CATTGATCTT AAACAACTAG AACAGGGCAT CCAATAAATA TTTATGGAAT 001600 001601 GAAGTGAGAA AGAAAAACTA AAAAGACCTC CCAGAAGTCA ACCACACCCA GATGGCCCAA CAATGCCTAT ATTGCCCTAG 001680 001681 CAGAACCAAT TTGGTTCCTG TGACTAAATT TATCTCACCT CCACCTGCCA TGCATCACCA CTAGACCCTT GCTGCAAGTT 001760 001761 TTCTATCAGC TCGGATGTAT GGAACCACAG TACAGTCATA TGCAGTAAAG GCAACAAATG CTTGTCCTTG AATCTGAACA 001840 001841 ATTTCTCAAG GCATTCACCG TCTGCCTTTT CCCTAGTTTA TTCAATTTGG GATAAAATGT GTTGAATGGA AGTTACGTTA 001920 001921 CTTTTGCATA AAAAGAAGTC TAAAAAAATC ACAATTTCTT TTTTCAAGAA TCAAGTTCTA ATTCAATTCA TCAAGCATTA 002000 002001 ATTAAGCATA AAGTTATATT CAAAGAAGCA CTGGGCTAAG AGTTTAGTAC TACAACAGAG ATCCCAGCAA AAAGTTAGAG 002080 002081 ATAAAGAGGA GGATGAAATC AATTCTGGAG ATAGGTGGAT AGGAAGAAGT GGGATAAGAA AGGTTAAAAA CAAACAACAA 002160 002161 AAAAGATATG GATAAAATGA AAAATATGAA ATAAGGTTGA GGAAGGCCAG GTTTGGTCAA ATCATAAAGA ACCTTGAATA 002240 002241 TTGACCTATG TAGGCAATGG GAACCATCGA AGATTTTATA GAAAGAAGCA AAATGATCAA AATTGTAATT TTAAAGGTCT 002320 002321 ACGCTACAAA AAACAAACTA CTTATATTTC TAATATAAAT CATTCTAAAA TCTCACATTC AAGTGGAACA CTTCCCCAAA 002400 002401 TAACCTTTAG ATGAACTAAA AATTAGTAAT GTGCTATAGA TGGCTGGGAA TAAAGCAAGG CACTCTCAGG ACTTTTTAAT 002480 002481 GATCCAAAAC AAACAAGTTT TGCCTACCAA ATTTTTCTAC TCCAGACCAA TAGAATTTTT TTTTTTTTTT AAAGACACAA 002560 002561 TTTTGCTCTG TCACCCAGGC TAGAGTACAG GGGGGCAATC TCAGCTCACT GCAACCTCTG CCTCCCAGGT TCAAATGATT 002640 002641 CTAATGCCTC AGCGCCAACG CACTCCAGCC TGGGCAACAG AGCGACTTCA TCTCAAAAAG AAAAAAAAAA CTGCTTGAAA 002720 002721 GCAAATACTT CCTAACATTA CTCTCAATCT GAAAGTTCCT GAAACACTTA CCAACCAGCT TTTCATTTCT CGTCTCTTTT 002800 002801 AGGAGGGTAT TTCAGAGATA CCCCCTTGTT CGTCATACTT CGGCAAATGT CATCAACGTG CATTTTCAGC ATTAAAAATA 002880 002881 ACGTAATTGG CTGGGTGCAG TGGCTCAAAC CTGTAATCCC ACCACTTTGG GAGGCTGAAG CAGGAGGATG GCTTGAGCCT 002960 002961 AGGAGCTCAA GACTAGCCTG AGCAACATGG CAAACCATCA TCTCTACAAA AAAAATTACA AAAATTAACC AAGCATGGTG 003040 003041 GCACACTTTT GTAGTCCCAG CTACTTGGAA GGCTGAGGTG AACCCACTAG GTCAAGGCTG GGTAAGACCC TGTCAAAAAT 003120 003121 AAATAAATAA CAACATAATT TTATTTTCCG AACAAAACAC TGTGGGCAAC TCAACTTGTA CTCAGTCCCA AGAAGTTAAT 003200 003201 TCAAAGTGGA ATTTCTACTG ACTAGTCAAA AGTGGAAAAA TATCCAACTA ACCTCCATAA TCAGTCCAAT TTAGCTCCCA 003280 003281 GATTTCAGAT ATAATAGATT ATTAGATCCT TGACTGAATT TACAAAGTTA CTTCTTATTG ATAGATGGCA AATCCTTCCA 003360 003361 GGTACAACTT CCTTCTCACA AGCTAAGGTT CCTTTTCTGC AGCTTTCTCA ACTCCTGACC TC |
Predicted Small Protein
Name | NONHSAT046670_smProtein_2846:2980 |
Length | 45 |
Molecular weight | 4968.7526 |
Aromaticity | 0.113636363636 |
Instability index | 65.5431818182 |
Isoelectric point | 7.95513916016 |
Runs | 9 |
Runs residual | 0.0414438502674 |
Runs probability | 0.0394806571278 |
Amino acid sequence | MSSTCIFSIKNNVIGWVQWLKPVIPPLWEAEAGGWLEPRSSRLA |
Secondary structure | LLLEEEEEELLLHHHHHHHHLLLLLHHHHHHLLLEELLLLLLLL |
PRMN | - |
PiMo | - |