NONHSAT046896
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT046896 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
696 nt |
Genomic location |
chr15-:68778690..68779779 |
Exon number |
2 |
Exons |
68778690..68779105,68779500..68779779 |
Genome context |
|
Sequence |
000001 GGAGAGAAGG CCATTCTGAG GTCAACTGAA ACCTCACTTG AGGGGCAGTT CCGTAGATGG GAATGAGGAG AGAGTCATGG 000080
000081 CCACAGCCAC CTGGCCAAGG AGAGAGGCCA TAACTGCCAG ACAGAACCAA GGATGGAGGG ACTTCAGCAG CACGAACAAT 000160 000161 CCACACTCAG CATGGGTCAC TCTCTGGGAC ACACATTTCC CTCTGGCTGA AAGGCTGAGC TGCTCCAGGG CCAACTGTGA 000240 000241 GGTCAGACAG CTGCCCAGGG ATGTCTCCAG CCACTCAAGG GAAGAAGAGA CCACTCACCT GTAATTTCAA CAGCAACAAA 000320 000321 AGACCTGAGG TTCCACCATC AGAACTTCAC GCCCTAAGGA AGATGCAGCA TTTCCTGTAA AATGCAAGTG CTCCCAGGCA 000400 000401 GAGGTAGCTC CCGAAGCCAT GATCAGTTAT GTATACCTTA GTGGCAGCTG ATTAACAGAC TCTTCCCCAG AGCCAGCTGA 000480 000481 CAGGAAGCAC ATCGGGGTAA AAGGGAAGAT GAAAACTTGG GTGCCTGGAG GAAGGGAACA AATGCGAGCA GGAGCATGGT 000560 000561 AATAACATAG GTAAAATAGC AGACGTTTAT ACATTACACc tgtgtgccag gcactgttgt aagtactgga tagatagACA 000640 000641 GATAAGTGGA TAGATAGAGA GCTAGAGCTa gagagagaga gtgagagaga gagaga |
Predicted Small Protein
Name | NONHSAT046896_smProtein_260:379 |
Length | 40 |
Molecular weight | 4490.2011 |
Aromaticity | 0.0512820512821 |
Instability index | 94.8333333333 |
Isoelectric point | 10.450012207 |
Runs | 5 |
Runs residual | 0.0405354449472 |
Runs probability | 0.0446917505742 |
Amino acid sequence | MSPATQGKKRPLTCNFNSNKRPEVPPSELHALRKMQHFL |
Secondary structure | LLLLLLLLLLLEELLLLLLLLLLLLHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |