NONHSAT046936
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT046936 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2418 nt |
Genomic location |
chr15-:69588684..69591102 |
Exon number |
1 |
Exons |
69588684..69591102 |
Genome context |
|
Sequence |
000001 ATTCCACAGC CTGAGGTGCC ACCAAAGCCA TAAGCCCAGG GGAGTCTCTC ACACCCCATT CTCCTAGGGC CCATGTACCC 000080
000081 CACGCCCACC TCCACCCCAG GAGCCGAAGG CCGGCAGGGA GCCTGGAGAG CCTCCTTGAT GGGAGAACTG CGGAGCTTGC 000160 000161 CCCTCGGAAA AGTGCATGGG GTGGAGAACA GGGAAGGAGA AAAAAACAAC AACTGGGTAC TCGCAGCCCC ACCGCGGTGT 000240 000241 CCGCTTCGCC GGTGGGAGAG GATCCTCGCC GCCCTGAATC CTTGAAGTGA GTTCCACCCC TGTCTCTTGG AGTGCTCAGG 000320 000321 GTGGCGGGCC CTTTGCCAGC CCTCACCCTT TCCCCAGGGA TCCTGTCCCA GGTCACAGGC TCCTAGACTG GAAGGCGCTG 000400 000401 GGCCTGGACC TCTGCCACTC AGTGGACACA GCTATAAGAG ATGAAGGGAC ACAGAGGACA AAGAAGAAAC ATTTGGCTTC 000480 000481 AGGGAACCAG ACTCTGTGTC TCCTCCCAGG TGCTGAAGGA ACAGGTTGCA GCTACCTGGT GCCCCCACCC CGACCCTGCC 000560 000561 AGAGAAAGGT TGGAACATCC ACACCTGTGG ACCGAAGTCC CCCACCAGGC TCTTTCCTCC CACCCTTCAG CCCCAGGCTC 000640 000641 TCTGAGCTCC TGCTCCTCCC TGCCTTGCCT TGTTTGCTGA GGGCACACAC AGTGGAGAGA GCACAGGACT GGGAGTCCAG 000720 000721 AGACCTGGGC TCTAGTCTAC TCTGTGACTC GGGTCAAGTC TCTGGCCCTT TGTGGGCCCA AGTTGCCCCA TTTGCAGTGA 000800 000801 ATAGGTTGCA GTCAATTATC TCCGGCCATT TTTACGGATC CTGAACCGTG GTCTTGGGCA CCTTGCTTTA TTAGGCTTTT 000880 000881 TGGTGGCTGT GCATCTTGTA AGGGTGTGTA TGCATGTGCG TGTGTGTGTG CGTGCGACAT GCGCTTGTCC TCTCAGACCC 000960 000961 AAGTTCTTAA AGGGAAAGAG ACTGGGGCCT ACACAGAGGC AGGCATGTAT ATTCCACAGA CCAGAGTTTG ACAAGAATGA 001040 001041 CTGGACACAA GAGTGGAGCC CAGTCCCAGC TCTATGCTGA ATTCAGAGTA GCCTTGGACA AGACCCTCAC CATCTACAAA 001120 001121 ATGGAGATTA ATAATCCCTG CTTTGCCTTT CCAAGGCTAG TCGGGGGACT CAGTGAGATA TTAGATATGA AGCTCTTTGA 001200 001201 AGGGGAATAG CACAGGGATG TGTGCTTTTG ATGTCTGGGC CAGTGATGGG TTTGGGGGAA GAATAGGGTG TGAAGCATTC 001280 001281 TCTGGGAGGC AAAGGCTGGC ACTGGACTGA TTGGCCACCC TGCCAAAGCT GCAGCATGCA CAGCACAGGC AGGCACCCCA 001360 001361 CCACCAGCAG CCAAGGTGAG CAGAGATGCC TGGTGCCCCA CCTGGATTCC TGCCTGCTGT AGGTATCTGT GTGTGCACCT 001440 001441 TGAAGAAACT AAAGAGGGAA GATAAAGAGG CTCCCAACCT AAATGGAGGT GGTCAGTGGA TTACTGATGA ATCGATCTGC 001520 001521 ATATCTTGGC CAAATCACCC TCCTCTGCTC TTAGGGAGTT TAAAGTCTAA CTGAATGATT GAACATGAAC CCTTTGGAGA 001600 001601 ATGATGTGGA GCCAGGAGAG GGGATTGTGG ATGGTGAGCA CACAGGATGA TCAGAGGAGG GGGAAGGGCA GGGAGGGGCC 001680 001681 GGGGAGGGGG GTACTTAGAC CACATGGAGA TGCATTTAGA GTATTGTGTT CAACACTCCT ATTTCATAGT GATGAAATGG 001760 001761 AGGCCCAGAG AGGGAAAGTG ACCTGCCCAA GGTCACACAG TCACAAGAAG TCAGTAGCAG AGCTAGAACT TGGACCCAGG 001840 001841 ACTTCAGGAA TCTATGCTGG ATTTGAGCCT CCTGTGCAGC CGAGGGAGAC CTGAAGTGTG GGAAGGACTG GGATACGTAC 001920 001921 CAGTGGGCAG GAAGAAAGAG TGAGGCAAAG TGCAGAGGTG GGAACTTTGT ACAGCAAGGG AAAGGAGCTG GAATCACAGG 002000 002001 CAGGATCTGG AAGGAGGGAG CTGCCCAGAC CTGGAAAGCC AGGCTGAGCA CTGCAGACCA CAGAGGGTTT CGAGCTGACA 002080 002081 CCAGTTGGGA AGATACAGGC GTGCGAGGGG CACACGCCCA AATGACCCAG TGAGACAGCA GGTGACATGA CAGCAAGGCA 002160 002161 GCAAGGAGAC GGGGAAGAGC AGCTCCAGGA GTCAGGCAAC CTCCAATCAA ATGGCCTTGA GCAAGTTGTC TCTCTTCTCT 002240 002241 GACCCTCAGT TTCTTTTTTG TGGAGTGAGA GATAATCATC TTTTTTTCCT TTCAGGGTTA TTGTAGTGAC CACAGAATGC 002320 002321 ATTTGGAAGT GCTCTGTAAA CTGCAGAGTG CTAAGTAAAT TTAATATTTG GAGTTGTGTT TTATTTTCCA AAGGGCTCAG 002400 002401 TAAACATTTG TGGAACTG |
Predicted Small Protein
Name | NONHSAT046936_smProtein_440:679 |
Length | 80 |
Molecular weight | 8787.9741 |
Aromaticity | 0.0379746835443 |
Instability index | 56.2683544304 |
Isoelectric point | 8.78948974609 |
Runs | 13 |
Runs residual | 0.0242760534073 |
Runs probability | 0.0339502398326 |
Amino acid sequence | MKGHRGQRRNIWLQGTRLCVSSQVLKEQVAATWCPHPDPARERLEHPHLWTEVPHQALSS HPSAPGSLSSCSSLPCLVC |
Secondary structure | LLLLLLLLLEEELLLLEEEELHHHHHHHHHHHHLLLLLHHHHLLLLLLLLLLLLHHHLLL LLLLLLLLLLLLLLLLEEL |
PRMN | - |
PiMo | - |