NONHSAT047231
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT047231 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
976 nt |
Genomic location |
chr15+:74683013..74685651 |
Exon number |
2 |
Exons |
74683013..74683728,74685392..74685651 |
Genome context |
|
Sequence |
000001 CTGGGCCTCC AGGAGGTCAT GACCTTCAAA GCAAGAATGA GGAAGCCCAC GATGGTAGCG TGGGGCCCTG CATGAAGTGC 000080
000081 CTGTGACGGG AGATGGAAGA ACTCTGTCAT ATGTCCGTGA GAGTGAAAGG AACCTCAAGC ATTCAAGGAA ACCAAACCGG 000160 000161 TACCCAAGAT AGATGAAGAG ATCAGGAATT TACCAGGTCA CAGAGGCTTC TTGGCAGCCA CCTGCAGGAG ACGGATAACA 000240 000241 CCATGGCCAG GGCCCCCATG CTCCATACCG TGTCTGTGAC CTCCACAGAC TCACTCCACA ATGTGACTTT GGGTAGGTCA 000320 000321 CAGTACCTGT ACGGCCTCAG CTTCCCCACC TGTCAGATGG GAAGAACAAC AGCGCCCTCC CCATGAAGCC ATCATGAGCA 000400 000401 CCACACCAGG TAAATCATGA CCTGCTCTCG TGCATGCAGG GATGTCAATG AAGACGAGTT CCTTTTCCCT GAAGTGATGA 000480 000481 AAGGGACTTT TAGAAAAGAG GAAGTGGGTG GATTCTTAGG AAACCTTAGT TCCATCCCAG GCAAGTGGCT CTGATGATTC 000560 000561 AGTAGGTGAC TTCCAGGTGT TCCCAGGAGG CGCAAGCTAC CAAAGTCATG TCCTCTCACC TGAATTTTCA TCCAGCCCAA 000640 000641 CCCTGCCTCT GGACACCTAT CCCCTCTTGG GACCTCGAGG CCAGGCCTGG AGAGGATGTG AACGCCTGGA GGCCCTGATA 000720 000721 TGTCACTGGA TCGCACCTCT CCAGTTGACG CTTCCCAATG GCTCCTGTGT CGCTCTCAGG AAAAGCCGGG GAATTATTGC 000800 000801 GTGCCCTGGC CTCCTTGCCT GCATCCTCTG CTCTCCTCCC TGCACCCTCC TCTCTCTGGC TGCACTGCAG AGGCCTCCCC 000880 000881 TGGGGTATCA GTTGAGGCAG GCTGGGGTGT GCTGTGGTGA CCATCCCTAC TCACTGGGCC TTAAAACAGA GAGGGGCATT 000960 000961 TCTCATTCCA GCTTCA |
Predicted Small Protein
Name | NONHSAT047231_smProtein_719:919 |
Length | 67 |
Molecular weight | 7116.0776 |
Aromaticity | 0.0757575757576 |
Instability index | 63.9954545455 |
Isoelectric point | 5.37603759766 |
Runs | 11 |
Runs residual | 0.0160587915079 |
Runs probability | 0.0290102937161 |
Amino acid sequence | MSLDRTSPVDASQWLLCRSQEKPGNYCVPWPPCLHPLLSSLHPPLSGCTAEASPGVSVEA GWGVLW |
Secondary structure | LLLLLLLLLLHHHHHHHHHLLLLLLEEELLLLLLLLLLLLLLLLLLLLLLEELLLLEEEL LEEEEL |
PRMN | - |
PiMo | - |