NONHSAT047245
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT047245 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1432 nt |
Genomic location |
chr15+:74779937..74796235 |
Exon number |
6 |
Exons |
74779937..74780355,74781580..74782140,74783301..74783376,74783805..74783923,74793922..74794041,74796133..74796235 |
Genome context |
|
Sequence |
000001 TTTTTTTTAG GCATAATGAA TGCTATTGCA CATGTAATAG ATTACAGTAT AGTGTAAACA TAACTTTTAC ATGCACTGGG 000080
000081 AAACAAAAAA ATGTGAGCCA GTGCACCTGG CTGAGAGGGG ATTTATTAGA GGAATTGGCT CATGTGATTA TGGTAGGCAA 000160 000161 AAAGTCCCAC AATGAGCCAT ATGCAAGCTG GAGACCCTGG GATGCTGGTA GCATGGCTCA ATCCAAGTCT GAAGGCCTCA 000240 000241 GAACCAGGGA GGCCAAGGGT GTAACTCTCA GGCCGAGCCC AGAGGCCTGA GAACTCAGGG AGGGGAGCCA CTGATGTAAG 000320 000321 TCCTGGAATC CAAAGGCCGA GAAGTCTGGA GTTATTGTCC AAGGACGGGA GAGGAAGAGT GTATCCCAGC TCCAGCAGGT 000400 000401 AGATCAGCAC ATTCATTTTT ATTTGGGATT ACAGGCACCT GCCATCATGC CTGGATAATT TTTGTACTTT TGTAGAGACA 000480 000481 GGGTCTCGCT CTGTTACTTA GGCCGGAGTG CAGTGGTACA ATCTTGGCTC ACTGCAACCC CAACCTCCTG GGCTCAAGTG 000560 000561 ATCCTCCCAT TTCAGCTTCC TGAGTAGCTA GGACTACAGA TGCACACCAC CACGCCTGGC TAATTTTTGT AGAGACAGCC 000640 000641 TCTTGCTATG TTTCTTAGAC TTGTCTCGAA TTCCTGGGCT CAAATGATCC ACCAGCCTCA GCCTCCCAAA GTGCTGGGAT 000720 000721 TGCAGGCATG AGCCACTGCG CCTGGTCTAA AAACACCCTT TTCATTCAGC ACTATAGGTT TTAAAAGGCA GTGTTCCCAT 000800 000801 AAGAAATAAT GGCAAAGAAA GGAACTCCCA GTCACATTCA GCAAACCTGT TTTCCCAGCT ACATTCATGC ACTGGTTGAT 000880 000881 GCAGGTAAGT GTACAGGGGA GGTTGATGGA GAGATAGGAG GGTCCTGGAA ACAAAGGAAG ACTGTGACAT TAGATGACTG 000960 000961 CAATCGTGGA GACTCAGATG GATACATCAG ACAGATGGTA TACATCTCTT CGTGACTCAA TCTGCTGAAC GATGCAACTG 001040 001041 TCACAGTATC CAACAGGCAG GGTCTTACTC TGTCACCTGG CCTGGAGTAC AGTGGCACAA TCACGCTTCA CTGCAGCCTC 001120 001121 AACCTCCCTG GCTCAAGCGA TCTTCCTACC TCAGGCTTCC AAGTAGTTGG GACAGATGAT CTTACTCTGT TGCCCAGGCT 001200 001201 GAAGTGCAGT GGCACGATCT TGGCTCACTA TAACCTTTGC CTCCCGGATT CAAGCAATTC TCCTGCCTCA GCCTCCCAAG 001280 001281 TAGCTGGGAC TACAGGCCGA CTAATATTCC GCTGCATCTT GCTGGGCACA GTGGCTCATG CCTGAAATCC AAGCACTTCG 001360 001361 GGAGCTTGAG GTGGGTGAAT CACTTGAGGT CAGGAGTTAC TACAGGTGCC CGCCACCACA CCCAGGTACT TT |
Predicted Small Protein
Name | NONHSAT047245_smProtein_149:289 |
Length | 47 |
Molecular weight | 5085.6511 |
Aromaticity | 0.0652173913043 |
Instability index | 66.9434782609 |
Isoelectric point | 9.81512451172 |
Runs | 7 |
Runs residual | 0.00918737060041 |
Runs probability | 0.019696166755 |
Amino acid sequence | MVGKKSHNEPYASWRPWDAGSMAQSKSEGLRTREAKGVTLRPSPEA |
Secondary structure | LLLLLLLLLLLLLLLLLLLLHHHLLLLLLLLEEEELLLEELLLLLL |
PRMN | - |
PiMo | - |