NONHSAT047316

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT047316

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1897 nt

Genomic location

chr15+:75630403..75632610

Exon number

3

Exons

75630403..75630761,75630987..75632219,75632306..75632610

Genome context

Sequence
000001 AGGTTCCGGT TCTGTGGTGA TCTGGACTGT CCCGACTGGG TCCTGGCAGA AATCAGCACG CTGGCCAAGA TGGTTGAGTG 000080
000081 CACAGGGTCT AGTCTGGGTG GAGGAGGGGT GTTGGGGGTG GGGATTGTGG GTGTAGAGGA TGGTGAGGTT TCTCTGGGGC 000160
000161 TAGGGCCTCA GTGCTCTCAG CCTGTGCTAC CATGCTTTGT GACCTTGATC AGTGGCTGGC CTGCTCTGAG CCAGTCCCCA 000240
000241 GGAAGGAGGG GTGAGGTTTG CCAGCCTGGC TGATGTAAGG ACTTCCCTTC CAGTCCTCTG TGAAGTTGCG GCTGCTCTGC 000320
000321 AGCCAGGTAC TAAAGGAGCT GCTGGGACAG GGGATTGATT ATGAGAAGAT CCTGAAGCTC ACGGCTGACG CCAAGTTTGG 000400
000401 TGAGTATCCC GCTGAGTCTA TAGGCCCCAG GCAACCCTGG GAACTTGGCC TGGTGCCTGG TACAGAGGGG CCCCCCACCC 000480
000481 CTCCCAGCAG CATCCTTAAC TTACCTTCCC TAGTGGAGGA GCATGAGGGA AAGAAAGACC GACAGTCCCA CCTTCCTGTC 000560
000561 CTCTGCCAGC TCCTGGTGGA GCAGTAGCAG TGCCTGTGGC TCCAGGAGGC CTGGGGGCTT TGAGCTAAAG TTAATAGGGC 000640
000641 AACAGGGAGG TGGCTGGACC CACAGTGACA CCCCCTGCCC CACCCACGGG TCCCTCAGAG TCAGGCGATG TGAAGGCCAC 000720
000721 AGTGGCAGTG CTGAGTTTCA TCCTCTCCAG TGCGGCCAAG CACAGTGTCG ATGGCGAATC CTTGTCCAGT GAACTGCAGC 000800
000801 AGCTGGGGCT GCCCAAAGGT ACGGGTTGTG GGTGGGCAGC TGGGCAGCCT GTGGGCCAAG GGCTGCTAGA GAAGGGGACA 000880
000881 GGCCCTGTGA CCCTGAGGTG TACCTGCCCT GTCTGGGCCA GGAGCCCAAG CCAGGCCCCG ACATGCTACC TCCAGAGCTA 000960
000961 CTCCATTCTA CCCCCAGAGC ACGCGGCCAG CCTGTGCCGC TGTTATGAGG AGAAGCAAAG CCCCTTGCAG AAGCACTTGC 001040
001041 GGGTCTGCAG CCTACGCAGT AAGTATGAGG CCAGCCAGGG TCCGGGCTCA TTCTAGAAGG TGCACGCAGC ACACAAAGTg 001120
001121 catggagagt ccagggagac gacttaacca cggtcacatg gttactagca gccgtagagc tgggacctgg ccctgggtct 001200
001201 cctgactccc cacaaggttt cttgtcactg AGGTCTGCTG TGGGTGATCA GAACTGATTA TCGGGCACCT GCCCTGTTCT 001280
001281 GAGCCTGGGT CAGCAGGATG GGAGCTTCTT AGAGGCCACA TAGCCTTGAA TGGTTGAGAG CTGAGCCAGG GTGTCGGCTG 001360
001361 AGGTCTACTT GGCTTGCCTG CTTTGATCCT GAGAGCCACC CACCCCATCT CACAGTGAAT AGGTTGGCAG GTGTGGGCTG 001440
001441 GCGGGTGGAC TACACCCTGA GCTCCAGCCT GCTGCAATCC GTGGAAGAGC CCATGGTGCA CCTGCGGCTG GAGGTGGCAG 001520
001521 CTGCCCCAGG GACCCCAGCC CAGCCTGTTG CCATGTCCCT CTCAGCAGAC AAGTTCCAGG TCCTCCTGGC AGAACTGAAG 001600
001601 CAGGCCCAGA CCCTGATGAG CTCCCTGGGC TGAGGAGAAG GGTGTTCCAG GCCTGTGTGG AGCCGCCCTG CCCGTATGGA 001680
001681 GTCACGCCCT CTGAACTGCT CTTCGGGAGG CAGCCCTGGT TCTAGGATGC TGAGGCCCTG GCCCGGACTC TGGCCTCCCA 001760
001761 GATCCCCAGC TGCCTCACTT CTCTCTTGAG AACTTGGCTC AGGGCTCCTG AGGACCTTTC CCAGCATTAC CTTCCCTTCC 001840
001841 CTTGAAAGGC AATTGTTGGC TGTTTTCATA AGCAGGAAAA ATAAACAGAA GTATAAA
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Predicted Small Protein

Name NONHSAT047316_smProtein_1004:1204
Length 67
Molecular weight 7454.548
Aromaticity 0.0454545454545
Instability index 83.2878787879
Isoelectric point 11.8607788086
Runs 9
Runs residual 0.0142442387951
Runs probability 0.0279200769397
Amino acid sequence MRRSKAPCRSTCGSAAYAVSMRPARVRAHSRRCTQHTKCMESPGRRLNHGHMVTSSRRAG
TWPWVS
Secondary structure LLLLLLLLLLLLLLLLEEEELLHHHHHHHHLLLLLLEEELLLLLLLLLLLLEEELLLLLL
LLLLLL
PRMN -
PiMo -