NONHSAT047316
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT047316 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1897 nt |
Genomic location |
chr15+:75630403..75632610 |
Exon number |
3 |
Exons |
75630403..75630761,75630987..75632219,75632306..75632610 |
Genome context |
|
Sequence |
000001 AGGTTCCGGT TCTGTGGTGA TCTGGACTGT CCCGACTGGG TCCTGGCAGA AATCAGCACG CTGGCCAAGA TGGTTGAGTG 000080
000081 CACAGGGTCT AGTCTGGGTG GAGGAGGGGT GTTGGGGGTG GGGATTGTGG GTGTAGAGGA TGGTGAGGTT TCTCTGGGGC 000160 000161 TAGGGCCTCA GTGCTCTCAG CCTGTGCTAC CATGCTTTGT GACCTTGATC AGTGGCTGGC CTGCTCTGAG CCAGTCCCCA 000240 000241 GGAAGGAGGG GTGAGGTTTG CCAGCCTGGC TGATGTAAGG ACTTCCCTTC CAGTCCTCTG TGAAGTTGCG GCTGCTCTGC 000320 000321 AGCCAGGTAC TAAAGGAGCT GCTGGGACAG GGGATTGATT ATGAGAAGAT CCTGAAGCTC ACGGCTGACG CCAAGTTTGG 000400 000401 TGAGTATCCC GCTGAGTCTA TAGGCCCCAG GCAACCCTGG GAACTTGGCC TGGTGCCTGG TACAGAGGGG CCCCCCACCC 000480 000481 CTCCCAGCAG CATCCTTAAC TTACCTTCCC TAGTGGAGGA GCATGAGGGA AAGAAAGACC GACAGTCCCA CCTTCCTGTC 000560 000561 CTCTGCCAGC TCCTGGTGGA GCAGTAGCAG TGCCTGTGGC TCCAGGAGGC CTGGGGGCTT TGAGCTAAAG TTAATAGGGC 000640 000641 AACAGGGAGG TGGCTGGACC CACAGTGACA CCCCCTGCCC CACCCACGGG TCCCTCAGAG TCAGGCGATG TGAAGGCCAC 000720 000721 AGTGGCAGTG CTGAGTTTCA TCCTCTCCAG TGCGGCCAAG CACAGTGTCG ATGGCGAATC CTTGTCCAGT GAACTGCAGC 000800 000801 AGCTGGGGCT GCCCAAAGGT ACGGGTTGTG GGTGGGCAGC TGGGCAGCCT GTGGGCCAAG GGCTGCTAGA GAAGGGGACA 000880 000881 GGCCCTGTGA CCCTGAGGTG TACCTGCCCT GTCTGGGCCA GGAGCCCAAG CCAGGCCCCG ACATGCTACC TCCAGAGCTA 000960 000961 CTCCATTCTA CCCCCAGAGC ACGCGGCCAG CCTGTGCCGC TGTTATGAGG AGAAGCAAAG CCCCTTGCAG AAGCACTTGC 001040 001041 GGGTCTGCAG CCTACGCAGT AAGTATGAGG CCAGCCAGGG TCCGGGCTCA TTCTAGAAGG TGCACGCAGC ACACAAAGTg 001120 001121 catggagagt ccagggagac gacttaacca cggtcacatg gttactagca gccgtagagc tgggacctgg ccctgggtct 001200 001201 cctgactccc cacaaggttt cttgtcactg AGGTCTGCTG TGGGTGATCA GAACTGATTA TCGGGCACCT GCCCTGTTCT 001280 001281 GAGCCTGGGT CAGCAGGATG GGAGCTTCTT AGAGGCCACA TAGCCTTGAA TGGTTGAGAG CTGAGCCAGG GTGTCGGCTG 001360 001361 AGGTCTACTT GGCTTGCCTG CTTTGATCCT GAGAGCCACC CACCCCATCT CACAGTGAAT AGGTTGGCAG GTGTGGGCTG 001440 001441 GCGGGTGGAC TACACCCTGA GCTCCAGCCT GCTGCAATCC GTGGAAGAGC CCATGGTGCA CCTGCGGCTG GAGGTGGCAG 001520 001521 CTGCCCCAGG GACCCCAGCC CAGCCTGTTG CCATGTCCCT CTCAGCAGAC AAGTTCCAGG TCCTCCTGGC AGAACTGAAG 001600 001601 CAGGCCCAGA CCCTGATGAG CTCCCTGGGC TGAGGAGAAG GGTGTTCCAG GCCTGTGTGG AGCCGCCCTG CCCGTATGGA 001680 001681 GTCACGCCCT CTGAACTGCT CTTCGGGAGG CAGCCCTGGT TCTAGGATGC TGAGGCCCTG GCCCGGACTC TGGCCTCCCA 001760 001761 GATCCCCAGC TGCCTCACTT CTCTCTTGAG AACTTGGCTC AGGGCTCCTG AGGACCTTTC CCAGCATTAC CTTCCCTTCC 001840 001841 CTTGAAAGGC AATTGTTGGC TGTTTTCATA AGCAGGAAAA ATAAACAGAA GTATAAA |
Predicted Small Protein
Name | NONHSAT047316_smProtein_1004:1204 |
Length | 67 |
Molecular weight | 7454.548 |
Aromaticity | 0.0454545454545 |
Instability index | 83.2878787879 |
Isoelectric point | 11.8607788086 |
Runs | 9 |
Runs residual | 0.0142442387951 |
Runs probability | 0.0279200769397 |
Amino acid sequence | MRRSKAPCRSTCGSAAYAVSMRPARVRAHSRRCTQHTKCMESPGRRLNHGHMVTSSRRAG TWPWVS |
Secondary structure | LLLLLLLLLLLLLLLLEEEELLHHHHHHHHLLLLLLEEELLLLLLLLLLLLEEELLLLLL LLLLLL |
PRMN | - |
PiMo | - |