NONHSAT047394
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT047394 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1086 nt |
Genomic location |
chr15-:76508471..76520590 |
Exon number |
3 |
Exons |
76508471..76508938,76518190..76518270,76520054..76520590 |
Genome context |
|
Sequence |
000001 gtaccactgc actccagcct gagcaacaca atgagaccct gtctcaaaGT AATAATGATA ATAACAATTG TTATATAGTA 000080
000081 TAATGAAAAA GCTTTCGGAT GATTAAACTC CCAGATGTCT GACTAAGTGG CCTCTAgaag aataatttac catcaataac 000160 000161 taaacaaatc tctgcttatc gccgtgaagc aggttacaca ttcccaaaag agaaacacgc caatgcaaat caacacctgc 000240 000241 aattcagaat gtttgttctt gtgcctttgg atttgaggct cacgtttgaa acttgtttat tgtctctgac tatgcatctt 000320 000321 aatgtgtgta gcatgtttct ctggattagc agttacctgg actataccat gttccaatct tagacattct ggcatcttct 000400 000401 gcacatctct ctgaggaacc cctctaaggg aaatacacag atgttggata tcctgtagcc tgtattttaa gtcaggctac 000480 000481 atcaaaatac ttaatgtatt ttttaatacc agctgttttc acaacataca atgccagACA ATTGTGGCAA TTAATAAAGA 000560 000561 CCCAGAAGCT CCAATTTTCC AAGTGGCAGA TTATGGAATA GTTGCAGATT TATTTAAGGT AGTTCCTGAA ATGACTGAGA 000640 000641 TATTGAAGAA AAAATGAATC AGGATCATGC CTTAAAAAGA AAACTTTTGT TAAAGTATTC CACTGAAATC ACAGATATTT 000720 000721 GTGGGTATTA TAACAATCAT TGGAAAGCAT GGAGAGCTAC ATTTCATAAT TTGAGGGAAA ATTTCTAACA GATGCCAGAA 000800 000801 TGCTTGTTTA TGGGATTGCT GTGTTTCCTT TTAATTATTT GTGGTTCCAA ACAATTATTG TTTGAACTTT TTAAATTCTG 000880 000881 TACTAAAATC TATAATAAAG CTTTTCCACA GCTTTAAAAC TATCAGAAAT ATGCCTAGCC TCTAGAGAAA ATTGAAGAAA 000960 000961 AGGAGtaaaa attttgttta tttatttatt tttttGCCTT TCTTGTTCAT GGAGAGCTCT ATGTTTTAGG AAGATTGTAA 001040 001041 ACATGATTGT CTCCACCAGC CTAATCAACC TACTAATCTC ATTGTT |
Predicted Small Protein
Name | NONHSAT047394_smProtein_248:382 |
Length | 45 |
Molecular weight | 5224.2261 |
Aromaticity | 0.159090909091 |
Instability index | 56.5431818182 |
Isoelectric point | 4.53509521484 |
Runs | 5 |
Runs residual | 0.0494652406417 |
Runs probability | 0.0573750220811 |
Amino acid sequence | MFVLVPLDLRLTFETCLLSLTMHLNVCSMFLWISSYLDYTMFQS |
Secondary structure | LEEEEELLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLL |
PRMN | LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTToooooooo |