NONHSAT047397
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT047397 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
461 nt |
Genomic location |
chr15-:76580109..76603743 |
Exon number |
4 |
Exons |
76580109..76580286,76584772..76584854,76587932..76588078,76603691..76603743 |
Genome context |
|
Sequence |
000001 CGGAAGCGGA GACCATGTTC CGAGCGGCGG CTCCGGGGCA GCTCCGGCGG GCGGCCTCAT TGCTACGATT TCAGAGTACC 000080
000081 CTGGTAATAG CTGAGCATGC AAATGATTCC CTAGCACCCA TTACTTTAAA TACCATTACT GCAGCCACAC GCCTTGGAGG 000160 000161 TGAAGTGTCC TGCTTAGTAG CTGGAACCAA ATGTGACAAG AGGAACTGAC ACCATTGATT TTGGCAACTC AGAAGCAGTT 000240 000241 CAATTACACA CACATCTGTG CTGGAGCATC TGCCTTCGGA AAGAACCTTT TGCCCAGAGT AGCAGCCAAA CTTGAGGTTG 000320 000321 CCCCGATTTC TGACATCATT GCAATCAAGT CACCTGACAC ATTTGTGAGA ACTATTTATG CAGGTGAGTA CTCAAGGAAG 000400 000401 ATAATTAATC AACATGTTAA ATTTTAGTGA AAAGCATAAA TTAATCTTGA AGATAGAATT T |
Predicted Small Protein
Name | NONHSAT047397_smProtein_14:208 |
Length | 65 |
Molecular weight | 6768.7635 |
Aromaticity | 0.03125 |
Instability index | 54.4328125 |
Isoelectric point | 10.0747680664 |
Runs | 11 |
Runs residual | 0.02328125 |
Runs probability | 0.0482728718023 |
Amino acid sequence | MFRAAAPGQLRRAASLLRFQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKC DKRN |
Secondary structure | LLLLLLHHHHHHHHHHHHHHLHHHHHHHHLLLLLLLHHHHHHHHHHLLLLEEEEELLEEE LLLL |
PRMN | - |
PiMo | - |