NONHSAT047879

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT047879

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1881 nt

Genomic location

chr15-:83674050..83680346

Exon number

3

Exons

83674050..83674444,83677300..83677427,83678989..83680346

Genome context

Sequence
000001 GCAGCGGGCT GAGGCACCTT CGGGCAACAC CCAATACTCG GGGCTCCGCT CGGCTTCTTT GCGCCGAGAT GCCTAAGAAG 000080
000081 GCTGGTGCGA CGACCAAGGC CAGTAGCAGG TCCCGTGGCG GCAGAGGGGT GGGCCTCAGG GGTACTTGTT GAAGAGCGCG 000160
000161 GGAGAAGCGG GGCCCGGGAG TGAGTGGAGG CACTGCCAGC GGCTTGCCGT CTCTCAGTTC CGGGGCTCAG GACAGCCGCC 000240
000241 GCCACCCCCA GAGCTGCGGC CTGCTGCCGT CGCCCCGCCT CAGTAGGCTG CGCTGCCGTC CACCTGGTGA TTTCTGAGCG 000320
000321 CTGGGCCCGG CGGCAGCCGA GCTCTCCTTG GGCTGCGTGt gctgaccttt ggcctcctac ccgcactccc agtccagcaa 000400
000401 ttcatgttcc cgcagcggca tgacctgcgt ttccccagga ggctgtattc tgctttctcc tcccttgctt tggctgatcg 000480
000481 caccccttct gtcaagaata cagcactccc atttccacca tctttgtttg gccaacccca gtccgtttct cagactcagc 000560
000561 tcaagcactg cctcctgctg gcagcattct ccagtgcccc aatgctgatt tgcctgtggg gtaatgttct gtgcctatct 000640
000641 catcggtgca cttagcacag tgtattataa ttttgtatgt tctttctccc tcgcagcagt ccgagctcct tgagagcaag 000720
000721 gaccatgtac cttttcatct ttacatatcc attgcctaca taTTTGTTGA ACGAAAGTTC CTAGCACAGC CCCTGTCCCA 000800
000801 TAACAGGCCT TTAAATATCA AGCACTATTT TTTTTTCCTC CCTTTCCCGC AACATGCAGA CATACACACt ttcaccaaca 000880
000881 tttattagct ccgactgcat gagatacaat gatgaataat aaatgatccc tgcccccaag gaattGGAAA TACAAAGCAG 000960
000961 AGGGAGGAGC AAGCATTAAG GTTTAGAAGC CAGAGTTAGG TTTTCTTGCA AGGGGGGAAA AAACACTGTT GGGTTGATGG 001040
001041 GAACCCTTCG TGGGAAAATT GAGTAGAGCC TTGAAGGTTG TGGGAAAAGC TTTCTAGGTG GCCAGAAGTC CCTGGACACC 001120
001121 ACTGATGAGC CTAGTTTGTC TGTTAAGGGT GAAAGGGGGT AGTGGAAGAA TCAAATTAAA TGTGTGGGAA AATATTTTGT 001200
001201 AACCTGTAAA GTTGTGTGGT TGTCATTTTA GGGTAAAAGC CAGAGCAAGG AACCAGAGAG ACCACTTCCT CCCTTAGGTC 001280
001281 CTGTGGCAGT TGATCCTAAA GGATGCGTCA CCATAGCCAT CCATGCAAAA CCTGGCTCCA AACAAAATGC TGTAACAGAT 001360
001361 TTGACAGCAG AGGCTGTAAA TGTAGCTATT GCAGCACCTC CATCAGAGGG AGAGGCTAAT GCTGAGCTCT GTCGGTATCT 001440
001441 TTCCAAGGTC CTAGAACTCA GGAAGAGTGA TGTGGTTTTG GATAAGGGTG GTAAATCTCG TGAAAAGGTG GTGAAGCTTT 001520
001521 TGGCTTCTAC AACTCCAGAA GAGATCTTGG AGAAATTAAA AAAGGAAGCC AAAAAAACAT AAAAGCAAGA AATGAggccg 001600
001601 ggcgcagtgg ctcatgcctg taatcccagc actttgggag gccgtggtgg gcggatcacc tgaggtcagg agttcgagac 001680
001681 cagcctgacc aacatggtga aaccccatct ctacgaaaaa tacaaaatta gccagatgtg atggcgcatg cctgtaatcc 001760
001761 cagttactca ggaggctgag gcaggagaat cacttgaacc tggggggcgg aggttgcagt aagccgagat cgcgccgttg 001840
001841 cactccagcc tgggcaacaa gagtgaaact ctctcccccc g
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Predicted Small Protein

Name NONHSAT047879_smProtein_419:607
Length 63
Molecular weight 6787.9584
Aromaticity 0.0645161290323
Instability index 90.414516129
Isoelectric point 8.42633056641
Runs 9
Runs residual 0.00847926267281
Runs probability 0.0124340026301
Amino acid sequence MTCVSPGGCILLSPPLLWLIAPLLSRIQHSHFHHLCLANPSPFLRLSSSTASCWQHSPVP
QC
Secondary structure LEEELLLLEEELLLHHHHHHHHHHHHHHHHLLLLLLLLLLLLEEEELLLLLLLLLLLLLL
LL
PRMN -
PiMo -