NONHSAT047901
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT047901 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
688 nt |
Genomic location |
chr15-:84033915..84035854 |
Exon number |
2 |
Exons |
84033915..84034553,84035806..84035854 |
Genome context |
|
Sequence |
000001 cgaggatgaa ggcttgcctt tttgatgatc cacttcccct taatgaacaa cggagtttcg ctctTGAACC TGGGAGGCGG 000080
000081 ACGTTTTTAA AAACAGCTGC CTGGAGAAGC GGCCGGACGC AGGGGAAGGC TGCGCTGCCG GAAAGGGTTA ACCCCGCGGG 000160 000161 CGCCGACATC TGGCAGGAGC GAGGGCGTTG GCAGAGCCCG GTCCGCCCGT ACCAGTCTGT ACAGGGGAAC TGTCCCGCCT 000240 000241 GCTGATTTAT CATTCCCTAA TGTCACGGGG ATGGGATGTT GAAATTGTGG CTAGAATGTG AAATACGAAA AACACGAAGA 000320 000321 TTATGATTTA GCGTCTGGGG AAGATCAGCG TTAGCCTGCA GAACAGCTTG TAAACGGGAG GCATCCTTGG CCCTAGCTTG 000400 000401 TGGTTTTTGA CTCCAACACT CAAGCTGGGG ATCTGGGCGG GCAGAGCTTT CTTGGGTTAG AGCAGACAGG CAAAAGTGGA 000480 000481 ATTAATAAGA GCAAAACCAC TTCTGTGCTG CTATGGGGAT AGTGCGGGCG AGCGCCAGGA GGACCAAAGT AAATTTTAAT 000560 000561 TAAACAGAGA CCTGATGTTG AAGGATAAAT AAAACAACGT GGGGTGTAAA CAGCTTAAAT CAGGGATTCA AATGACACCT 000640 000641 GCGGGTGTCT AGACATGAGG TGCATCCTGA TAATTTATAG TCTCGGAG |
Predicted Small Protein
Name | NONHSAT047901_smProtein_5:244 |
Length | 80 |
Molecular weight | 8885.0013 |
Aromaticity | 0.0886075949367 |
Instability index | 87.3189873418 |
Isoelectric point | 9.73870849609 |
Runs | 9 |
Runs residual | 0.0263568579851 |
Runs probability | 0.0364187717129 |
Amino acid sequence | MKACLFDDPLPLNEQRSFALEPGRRTFLKTAAWRSGRTQGKAALPERVNPAGADIWQERG RWQSPVRPYQSVQGNCPAC |
Secondary structure | LEEEELLLLLLLLHHHLLLLLLLLLLHHHHHHHHLLLLLLLLLLLLLLLLLLLHHHHHLL LLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |