NONHSAT048121
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT048121 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1013 nt |
Genomic location |
chr15-:86629031..86659938 |
Exon number |
6 |
Exons |
86629031..86629604,86631535..86631574,86650766..86650885,86653004..86653092,86653674..86653770,86659846..86659938 |
Genome context |
|
Sequence |
000001 gaagacctga ggtatcaggg gtaggggttg ctctgcttgt gtaagtccca tagtgtgaag gccagagaac caagagatgg 000080
000081 tcaagaagag agacaagacc aaccccgcct cttccttctc cttctcgacc tactcaaagt aaagatgagg atgaagaccc 000160 000161 ttaagatgat ccactcccac ttaatgaata gagcatcacg acctgtgcag actccccagc atcataacag gaaggtccca 000240 000241 cgatcacgag cacattgcct tcagcatcca gcactgaatA TGGTGAATTG CACTCTGAAG AGCTTCCTAA GCTTGTAAGA 000320 000321 AAGTGATTCT GAAAAGCTCA ACATTTTGGT AGAATGGAGA GATTTGACAT TGCTTCTGCT CCAAAAGCAA AAGACTTGGG 000400 000401 AAGGGCACCC TGGGAGTTGA GAACATCCAC CACAGAGAGG CCTGGCGTAA AGGAGATGGG ACTCACACCC AAGAGGATGC 000480 000481 ATTTCCATAC ACCCATTTCT GAAATATGAA GAGGTGTCCA GTCTGTTTGA TTCATAGCTG CCTGTTCCAC AACTGCAGAT 000560 000561 ACAGTAATTG ATAACCGAGA CCAAGTTCTC ATCCCCATCT CCCAGGGCTG GAACTGGGGC TGTGTTTGGT TCTCATAAGA 000640 000641 TCAGTTCCAG TTTTAGAAAC TGAGTAAATT GTGGAGTAAA TATTGCCAAG TGATGGCTTT CTGCTGTAGG CGTGGGTCGC 000720 000721 TGTTGGCCAT TTGCCTCAGC ATATCACCAG CAATGCACCT CATTGCATCA CTGCATTTCC AATTACACCT CAAAGCACCA 000800 000801 CTGGTCCCCT GTCCACCCTC TGCCCTGCAG AGGTGGGTGT TCAGGGAGAC AGATCCAAAA TCTGGGCTCA GAAGATGGAA 000880 000881 ATGCCAACTG CTCTCAATTT GAGAGTGGGG ATGAGACTTT TTGACTCAAC TCTGGTTAAT TCAGCCATGC TGTCAGAGCT 000960 000961 GCTTTGATGC AAGGACATCT GAATGCTATC TGAATGCTGC CCCTAAAATA ACA |
Predicted Small Protein
Name | NONHSAT048121_smProtein_692:901 |
Length | 70 |
Molecular weight | 7814.3908 |
Aromaticity | 0.0724637681159 |
Instability index | 79.1942028986 |
Isoelectric point | 9.96356201172 |
Runs | 11 |
Runs residual | 0.0200889654183 |
Runs probability | 0.0597228244287 |
Amino acid sequence | MAFCCRRGSLLAICLSISPAMHLIASLHFQLHLKAPLVPCPPSALQRWVFRETDPKSGLR RWKCQLLSI |
Secondary structure | LLEELLLLLHHHHHHLLLHHHHHHHHHHHHHHHLLLLLLLLLHHHHHHHHHHLLLLLLHH HHHHHHHLL |
PRMN | LLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLL |
PiMo | iiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooooooooooooooooooooooo ooooooooo |