NONHSAT048122
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT048122 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1105 nt |
Genomic location |
chr15-:86629031..86659938 |
Exon number |
6 |
Exons |
86629031..86629604,86631535..86631574,86650766..86650885,86653004..86653150,86653674..86653770,86659812..86659938 |
Genome context |
|
Sequence |
000001 gaagacctga ggtatcaggg gtaggggttg ctctgcttgt gtaagtccca tagtgtgaag gccagagaac caagagatgg 000080
000081 tcaagaagag agagtaagtg tccaatgtcc cagctcaaga agagagacaa gaccaacccc gcctcttcct tctccttctc 000160 000161 gacctactca aagtaaagat gaggatgaag acccttaaga tgatccactc ccacttaatg aataaaactt ttgtggatag 000240 000241 ctaagttact gctagccatc tgattatagc aatggcttcc aggagcatca cgacctgtgc agactcccca gcatcataac 000320 000321 aggaaggtcc cacgatcacg agcacattgc cttcagcatc cagcactgaa tATGGTGAAT TGCACTCTGA AGAGCTTCCT 000400 000401 AAGCTTGTAA GAAAGTGATT CTGAAAAGCT CAACATTTTG GTAGAATGGA GAGATTTGAC ATTGCTTCTG CTCCAAAAGC 000480 000481 AAAAGACTTG GGAAGGGCAC CCTGGGAGTT GAGAACATCC ACCACAGAGA GGCCTGGCGT AAAGGAGATG GGACTCACAC 000560 000561 CCAAGAGGAT GCATTTCCAT ACACCCATTT CTGAAATATG AAGAGGTGTC CAGTCTGTTT GATTCATAGC TGCCTGTTCC 000640 000641 ACAACTGCAG ATACAGTAAT TGATAACCGA GACCAAGTTC TCATCCCCAT CTCCCAGGGC TGGAACTGGG GCTGTGTTTG 000720 000721 GTTCTCATAA GATCAGTTCC AGTTTTAGAA ACTGAGTAAA TTGTGGAGTA AATATTGCCA AGTGATGGCT TTCTGCTGTA 000800 000801 GGCGTGGGTC GCTGTTGGCC ATTTGCCTCA GCATATCACC AGCAATGCAC CTCATTGCAT CACTGCATTT CCAATTACAC 000880 000881 CTCAAAGCAC CACTGGTCCC CTGTCCACCC TCTGCCCTGC AGAGGTGGGT GTTCAGGGAG ACAGATCCAA AATCTGGGCT 000960 000961 CAGAAGATGG AAATGCCAAC TGCTCTCAAT TTGAGAGTGG GGATGAGACT TTTTGACTCA ACTCTGGTTA ATTCAGCCAT 001040 001041 GCTGTCAGAG CTGCTTTGAT GCAAGGACAT CTGAATGCTA TCTGAATGCT GCCCCTAAAA TAACA |
Predicted Small Protein
Name | NONHSAT048122_smProtein_104:175 |
Length | 24 |
Molecular weight | 2638.9485 |
Aromaticity | 0.130434782609 |
Instability index | 52.7956521739 |
Isoelectric point | 10.171081543 |
Runs | 5 |
Runs residual | 0.0103519668737 |
Runs probability | 0.0100865571454 |
Amino acid sequence | MSQLKKRDKTNPASSFSFSTYSK |
Secondary structure | LLHHHLLLLLLLLLLLLEEELLL |
PRMN | - |
PiMo | - |