NONHSAT048198

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT048198

Source

NONCODE4.0

Same with

,

Classification

sense

Length

730 nt

Genomic location

chr15+:89193484..89198881

Exon number

4

Exons

89193484..89193560,89194597..89194812,89195341..89195541,89198646..89198881

Genome context

Sequence
000001 CCAACGGCAG CTGAGTGAAA GCAAGCTGAC TGGCCTGTGT GACCAGAGCA GGGCAGGCTG TCCATGTGGG AGGCGAGttc 000080
000081 tgtagtttcg aagttcagcg tgggtctcac tggtctaaaa tcaaagtgtc agtggggcta ggttccttct ggatgctctg 000160
000161 gggaagaatc catttcctcg ccctttctgg cttctagagg ctgcctgaat accttaactc acggcccctc cctccatctt 000240
000241 caaagccagc aacagcctgt tttcctcatg tggattcact ctgacctcca catATCCTGC AGCTCCTGAA AGGCAAGCTG 000320
000321 GTGGTGGGTC ATGACCTGAA GCACGACTTC CAGGCACTGA AAGAGGACAT GAGCGGCTAC ACAATCTACG ACACGTCCAC 000400
000401 TGACAGGCTG TTGTGGCGTG AGGCCAAGCT GGACCACTGC AGGCGTGTCT CCCTGCGGGT GCTGAGTGAG CGCCTCCTAC 000480
000481 ACAAGAGCAT CCAGAACAGC CTGCTTGGAC ACAGCTCGGT GGAAGATGCG AGGGCAACGA TGGAGCTCTA TCAAATCTCC 000560
000561 CAGAGAATCC GAGCCCGCCG AGGGCTGCCC CGCCTGGCTG TGTCAGACTG AAGCCCCATC CAGCCCGTTC CGCAGGGACT 000640
000641 AGAGGCTTTC GGCTTTTTGG GACAGCAACT ACCTTGCTTT TGGAAAATAC ATTTTTAATA GTAAAGTGGC TCTATATTTT 000720
000721 CTCTACGCCA
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Predicted Small Protein

Name NONHSAT048198_smProtein_368:610
Length 81
Molecular weight 9297.5466
Aromaticity 0.05
Instability index 45.00375
Isoelectric point 10.1416625977
Runs 12
Runs residual 0.0111842105263
Runs probability 0.0439336395219
Amino acid sequence MSGYTIYDTSTDRLLWREAKLDHCRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMEL
YQISQRIRARRGLPRLAVSD
Secondary structure LLLEEEELLLLHHHHHHHHHHHLLLLEEHHHHLHHHHHHHHHHHHLLLLLHHHHHHHHHH
HHHHHHHHHHHLLLLLLLLL
PRMN -
PiMo -