NONHSAT048198
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT048198 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
730 nt |
Genomic location |
chr15+:89193484..89198881 |
Exon number |
4 |
Exons |
89193484..89193560,89194597..89194812,89195341..89195541,89198646..89198881 |
Genome context |
|
Sequence |
000001 CCAACGGCAG CTGAGTGAAA GCAAGCTGAC TGGCCTGTGT GACCAGAGCA GGGCAGGCTG TCCATGTGGG AGGCGAGttc 000080
000081 tgtagtttcg aagttcagcg tgggtctcac tggtctaaaa tcaaagtgtc agtggggcta ggttccttct ggatgctctg 000160 000161 gggaagaatc catttcctcg ccctttctgg cttctagagg ctgcctgaat accttaactc acggcccctc cctccatctt 000240 000241 caaagccagc aacagcctgt tttcctcatg tggattcact ctgacctcca catATCCTGC AGCTCCTGAA AGGCAAGCTG 000320 000321 GTGGTGGGTC ATGACCTGAA GCACGACTTC CAGGCACTGA AAGAGGACAT GAGCGGCTAC ACAATCTACG ACACGTCCAC 000400 000401 TGACAGGCTG TTGTGGCGTG AGGCCAAGCT GGACCACTGC AGGCGTGTCT CCCTGCGGGT GCTGAGTGAG CGCCTCCTAC 000480 000481 ACAAGAGCAT CCAGAACAGC CTGCTTGGAC ACAGCTCGGT GGAAGATGCG AGGGCAACGA TGGAGCTCTA TCAAATCTCC 000560 000561 CAGAGAATCC GAGCCCGCCG AGGGCTGCCC CGCCTGGCTG TGTCAGACTG AAGCCCCATC CAGCCCGTTC CGCAGGGACT 000640 000641 AGAGGCTTTC GGCTTTTTGG GACAGCAACT ACCTTGCTTT TGGAAAATAC ATTTTTAATA GTAAAGTGGC TCTATATTTT 000720 000721 CTCTACGCCA |
Predicted Small Protein
Name | NONHSAT048198_smProtein_368:610 |
Length | 81 |
Molecular weight | 9297.5466 |
Aromaticity | 0.05 |
Instability index | 45.00375 |
Isoelectric point | 10.1416625977 |
Runs | 12 |
Runs residual | 0.0111842105263 |
Runs probability | 0.0439336395219 |
Amino acid sequence | MSGYTIYDTSTDRLLWREAKLDHCRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMEL YQISQRIRARRGLPRLAVSD |
Secondary structure | LLLEEEELLLLHHHHHHHHHHHLLLLEEHHHHLHHHHHHHHHHHHLLLLLHHHHHHHHHH HHHHHHHHHHHLLLLLLLLL |
PRMN | - |
PiMo | - |