NONHSAT048316
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT048316 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
840 nt |
Genomic location |
chr15+:89995601..89996440 |
Exon number |
1 |
Exons |
89995601..89996440 |
Genome context |
|
Sequence |
000001 ccgagttcaa gcaattctcc tgcctcagcc tctcgagtag ctaggactac aggcatgtgc catatcaccc ggctaatttt 000080
000081 tgtattttta gtaaagacag ggtttcgcca tgttggccac caggctggtc tcaaactcct gtcttcaagt gatctgccag 000160 000161 cctcggcctc ccaaagtgct gaaattactg gcgtgagcca ctgtgcccag ccACAGGGTA ACTAACCCAG TTCTATTAAT 000240 000241 AGCACTAGcc ccaccctctg ggggagggtt ctgggtggtt taagtcattc acagaggtcc cagtcctcac accagtgagt 000320 000321 ggttgaggca tcgaagtgtg CTGTGCCATT GGCAcagtca gctactgcag cctaacaaac tacttcaaaa cttaaaataa 000400 000401 cagcatttct tttgctcaac acaactgtaa ttggggcagg aatcagtgag gacgacttgt ctctgccatg tggtgtcagg 000480 000481 tgggccaaga tgactgggac tgaagggccc atttccaaga gggctcactc acatggctgg caagttgtgc cagctgtaga 000560 000561 ctggtcaccc agcctaggct gagggccagg ggacccctgc ttggctgggt tccaaaagtg agtgtcccaa gagacaagaa 000640 000641 gtagaagctg atggtttttt atggtctgag ccctaagaaa ctggcagtgt cacttttgtc ctagtttatt ggtcaagcag 000720 000721 gaacttgacc cacctagctc agattcaagg gagggtatag acctcacgtc tcaaagggag gggtataatt taagggcgac 000800 000801 gttgttaaaa ctgtcatagc caagagaaca tgggaagtct |
Predicted Small Protein
Name | NONHSAT048316_smProtein_650:703 |
Length | 18 |
Molecular weight | 1853.2716 |
Aromaticity | 0.117647058824 |
Instability index | 44.4476470588 |
Isoelectric point | 9.70025634766 |
Runs | 5 |
Runs residual | 0.00735294117647 |
Runs probability | 0.01294824236 |
Amino acid sequence | MVFYGLSPKKLAVSLLS |
Secondary structure | LEEELLLHHHHHHHHLL |
PRMN | - |
PiMo | - |