NONHSAT048319
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT048319 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1182 nt |
Genomic location |
chr15-:90048161..90067265 |
Exon number |
3 |
Exons |
90048161..90048838,90053304..90053354,90066812..90067265 |
Genome context |
|
Sequence |
000001 GGGTGATTCT TTTGGACTAA TTCATGTGGC TGCAATTGGA GCTGGATGAT CTAAATGGTC TCACTCCTAG GTCTGGCTGT 000080
000081 TGATGTTGGC TGTTGGCTGA GCCAGGGGCC GCCAGCAGGC TAGCATGGGC TCTTCACTCA GCAGCAGGGT TCCCCAAGAG 000160 000161 GACAAGCCCA ACACACATGT GCTTTTCAAG CCTGTGATTA TCAGGCTTGA AATACTGCAA CATCTGCTGC AATCAGTAAC 000240 000241 AACCACATAA GAAAGCAATG ACAAGTTATG ATTACTGCTC TGGAGGGAGT GAGCAGGATG CTGTGAGAGA GGGTTACTAT 000320 000321 TCCAAGTGGC ACCTGGGCCA GCAGCATTGG CATCACCTGG GACTTGTGAG AAATCCAGCA TCTCAGGCTC CACTGCAGGT 000400 000401 CTCCTAAATC AGAATCTACA GTTTAACAAG ATCCCCAGCA GATGTGTGTG TAAGCTCAAG AACCTGTTGA GAGGAGCACC 000480 000481 TAGCATAAGA CCTGGCTTGT GACAGGAGCG CCCAGTTCAT GGAGGCTGCT GCTGTCACTA ATCTGTTTCC ATCTTCCCCT 000560 000561 GGGAATCCTG AGGTTTATCT GTGAGCCTTT GGACTGCTGT ATGGACAACA TACTCTGCAG TAGCATGAAG AAGTGAGTGA 000640 000641 AGACCCTCCC TTGAACCGTT TGCCCTGAAA GAACAGAAGT CACATCTTGA TATCTCAGTG CCTTTACAGT GCCAGGGATG 000720 000721 GGGTAGGTGC TGAGCGCCTG GTATGTGCTC ACCCTATGCT GTACAACACA CAGAAAGCCC CACAGGGTTT GAACTGTAAT 000800 000801 TAGGTAGAGG GTGTGTGGGA CTCGCCTTGG GTCTCTGACT TTGGCTTCTG CTCCCGGCCT TGGATAGGCT GATATTTTCT 000880 000881 AGTAGATATC AGAGACTCCG GTTGATAGCA CCACAATGGC TTTTCTCCCA ACTTTTTGTT TTACGTATTA TCAAGCCAAC 000960 000961 AGAGAAGTTG CAAGAATAGC ACAATGAACA TGCATATACC CTTCACCTGG ATTCACCACT TTTGTTTCAT TTCTCTCAGT 001040 001041 ATATATGTTT GTGTGTGTTG GAGACATATG ACATTTTACC TCGAAACCAG GCATCTCCTA GGAAAAAGAG CAGCCTCCCA 001120 001121 TATAACAACA ATACAATGAT AACCCTTAAA AAACTTTGCA TTAATAAATC CCATTAGTTA AT |
Predicted Small Protein
Name | NONHSAT048319_smProtein_983:1138 |
Length | 52 |
Molecular weight | 6192.3161 |
Aromaticity | 0.156862745098 |
Instability index | 62.61 |
Isoelectric point | 9.10052490234 |
Runs | 7 |
Runs residual | 0.0169869928169 |
Runs probability | 0.0375627728569 |
Amino acid sequence | MNMHIPFTWIHHFCFISLSIYVCVCWRHMTFYLETRHLLGKRAASHITTIQ |
Secondary structure | LLLLLLEEEEELEEEEEEEEEEEEELHHHHHHHHHHHHHHHHHHHHHLLLL |
PRMN | LLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | oooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiii |