NONHSAT048332
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT048332 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
646 nt |
Genomic location |
chr15-:90220995..90234013 |
Exon number |
3 |
Exons |
90220995..90221163,90224501..90224771,90233808..90234013 |
Genome context |
|
Sequence |
000001 AGAAAGTGTG CCCGCCCCCT CTGGGGCGGA GAGACTCAGC CCCTCCCCCT CAGCGGATAA CCTGGGACTG ACCGTTCCCT 000080
000081 GGGGATCCGA CGGGCCCCAG AGGACCCACG CCTGAGCCCC GTGCGACTCG TGGCCTTTGG GCTAGAAGCC ATGGACGCCT 000160 000161 TCACCCGCTT CACCAACCAG ACCCAGGGCC GGGACCGACT CTTCAGACAA AATTGACTTG TGTCTGTGAG TGTGTTCTGG 000240 000241 GAAGAGAGAA GAGTTAAACA TAAGGCAATC CATCAGATAA TCCTCAATCA GCCTACACAG TTGGTACAGC GAGCTCTGGG 000320 000321 CTAGAAGATC CAGGCTGAGG AGGAGGATGG AGAAAGATTG AGATGTAGAG CCTCTGGGTT GAGAGGGACC TCTGAAATGA 000400 000401 ACTCATCTAG ACTGCTGCCA TGGAGATGGT GCTCTACAGT AGCCCTGTCA ATCGCTGGCT GGCTTCTGCC TAGGTAAaaa 000480 000481 aaaaaaaaaa aactagccgg gcgtggtggt gggcgcctgt aatcccagct acttgggagg ctgaggcagg agaatccctt 000560 000561 gaacccggga ggcggaggtt gtagtgagcc gagattgtgc aactacactc cagcctgggc aacagagcaa gaatccatct 000640 000641 caaaaa |
Predicted Small Protein
Name | NONHSAT048332_smProtein_419:472 |
Length | 18 |
Molecular weight | 1954.2728 |
Aromaticity | 0.117647058824 |
Instability index | 98.8705882353 |
Isoelectric point | 5.75299072266 |
Runs | 5 |
Runs residual | 0.00735294117647 |
Runs probability | 0.0341812400637 |
Amino acid sequence | MEMVLYSSPVNRWLASA |
Secondary structure | LEEEEELLLHHHHHHLL |
PRMN | - |
PiMo | - |