NONHSAT048422
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT048422 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
640 nt |
Genomic location |
chr15-:91333268..91333891 |
Exon number |
1 |
Exons |
91333268..91333891 |
Genome context |
|
Sequence |
000001 AGAGAGCTAG CACCAGAACC TGATATAAAA GCAAAAGCTT ATTAGATTCA TAAGGCACAG ACTTGAAGGA ACATTTTCAT 000080
000081 AATAGATGCT TCTAAAAGCT CTATCATTTG TTTTACTTTA AAATGCACAC TACATAACAA CCTAATATCT TAACTTGGTC 000160 000161 CAACTATTTA GTATAACTAA TATGAGTTTT TATACTGATA ACTTGCAATG CCATTAAAAC CCAAGAAGGT AAAGAGAAGC 000240 000241 TCAGCATGGC AGGCACTTTC TTGTATGACT TGGCATTCTC ATGTAAGAGA GCCAGAATCA ACTGCAGTCA GCCCACGATG 000320 000321 TGCTGCCACT GTTCTCTGTT TTTGCTACTG AGGTGTGGGG GGTGTTGCTC ACACAGTCAT GATATCCAGG TCAGTGATCA 000400 000401 CAAGCAACGT GTTGCTCAGG AGCTCCAGGG TGTTCCCAGG GCTCCTCAGA GGTCACTGCT GCTAGTTCCT CCAATGGTTC 000480 000481 AGGAACAATA CGTTCTTACC TGCTCCACTG CTTATCATCA GTTTTCCCAA TAGCAACAGC TGATNACACA TCAACTCCTT 000560 000561 CTATTCATCA AGCTGGATTT AAAGTCAAAA GCTTGTACAA TTTTAATGGG AACTCATGTT GGTAAAAGTC TGAAGAAGCC 000640 |
Predicted Small Protein
Name | NONHSAT048422_smProtein_245:532 |
Length | 96 |
Molecular weight | 10690.339 |
Aromaticity | 0.0736842105263 |
Instability index | 60.0789473684 |
Isoelectric point | 8.43316650391 |
Runs | 15 |
Runs residual | 0.0288437629507 |
Runs probability | 0.0482188070423 |
Amino acid sequence | MAGTFLYDLAFSCKRARINCSQPTMCCHCSLFLLLRCGGCCSHSHDIQVSDHKQRVAQEL QGVPRAPQRSLLLVPPMVQEQYVLTCSTAYHQFSQ |
Secondary structure | LLLLHHHHHHHHHHHHEELLLLLLEEHHHHHHHHHHLLLLLLLLLLLLLLLHHHHHHHHH LLLLLLLLEEEELLLLLLLEEEEEEEELLEEEELL |
PRMN | - |
PiMo | - |